RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 OR5AR1Q8NGP9 310 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 SNIP1Q8TAD8 396 aaKnown RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 AHCYL2Q96HN2 611 aaKnown RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 TMEM121BQ9BXQ6 578 aaPredicted RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 POLR1BQ9H9Y6 1135 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 IMP3Q9NV31 184 aaKnown RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 TMEM184CQ9NVA4 438 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 ACTR10Q9NZ32 417 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 GALPQ9UBC7 116 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 PTBP2Q9UKA9 531 aaKnown RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 TLK1Q9UKI8 766 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 PCDHB3Q9Y5E6 796 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 FAM186AA6NE01 2351 aa7.27□□□□□ -1.24
USP16-204ENST00000399976 PIPSLA2A3N6 862 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 OR2A25A4D2G3 310 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 PABPN1LA6NDY0 278 aaKnown RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 OR52A4PA6NMU1 304 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 IQCF5A8MTL0 148 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 MAP3K7O43318 606 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 ATP8B1O43520 1251 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 MT-ND3P03897 115 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 C2P06681 752 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 IMPA1P29218 277 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 SERPINB5P36952 375 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 ALDH18A1P54886 795 aaKnown RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 HSD11B2P80365 405 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 GGTA1PQ4G0N0 100 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 ZC3H12BQ5HYM0 836 aaKnown RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 TMTC4Q5T4D3 741 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 ISCA2Q86U28 154 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 PRR11Q96HE9 360 aaPredicted RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 TAAR9Q96RI9 348 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 CMKLR1Q99788 373 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 SPRY4Q9C004 299 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 IL1RAPL1Q9NZN1 696 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 SIRPGQ9P1W8 387 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 STOX2Q9P2F5 926 aaPredicted RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 SLC39A10Q9ULF5 831 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 SNX7Q9UNH6 387 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 TMEM184BQ9Y519 407 aaPredicted RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 E7ENX8 843 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 H3BMH7 237 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 SRPX2O60687 465 aaPredicted RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 CSO75390 466 aaKnown RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 RPL10P27635 214 aaKnown RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 CMPK1P30085 196 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 HPDP32754 393 aaPredicted RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 OR1D5P58170 312 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 DNAJB13P59910 316 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 TAP2Q03519 686 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 PRDX1Q06830 199 aaKnown RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 GALNT1Q10472 559 aaPredicted RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 BIRC2Q13490 618 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 LAPTM5Q13571 262 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 KRT33BQ14525 404 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 SETDB1Q15047 1291 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 PRAMEF14Q5SWL7 426 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 CAPN13Q6MZZ7 669 aaPredicted RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 CEACAM20Q6UY09 585 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 ZNF574Q6ZN55 896 aaPredicted RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 SLC22A9Q8IVM8 553 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 RHBDF1Q96CC6 855 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 PKP4Q99569 1192 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 NDNQ99608 321 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 ASPSCR1Q9BZE9 553 aa7.27□□□□□ -1.25
USP16-204ENST00000399976 CCDC177Q9NQR7 707 aaPredicted RBP7.27□□□□□ -1.25
USP16-204ENST00000399976 A0A096LPK6 155 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 CPED1A4D0V7 1026 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 UGT2B7P16662 529 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 AMD1P17707 334 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 PEBP1P30086 187 aaKnown RBP7.26□□□□□ -1.25
USP16-204ENST00000399976 TGFBIQ15582 683 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 TCTE1Q5JU00 501 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 GARNL3Q5VVW2 1013 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 TLDC1Q6P9B6 456 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 PIAS4Q8N2W9 510 aaPredicted RBP7.26□□□□□ -1.25
USP16-204ENST00000399976 DNAJC22Q8N4W6 341 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 LINC01555Q8NAE3 123 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 KDF1Q8NAX2 398 aaPredicted RBP7.26□□□□□ -1.25
USP16-204ENST00000399976 TTLQ8NG68 377 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 OR2A1Q8NGT9 310 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 ZNF480Q8WV37 535 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 PATE1Q8WXA2 126 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 GATA6Q92908 595 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 L3HYPDHQ96EM0 354 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 MVB12AQ96EY5 273 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 CCDC74BQ96LY2 380 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 TSNARE1Q96NA8 513 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 TRAPPC9Q96Q05 1148 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 MRPL46Q9H2W6 279 aaKnown RBP7.26□□□□□ -1.25
USP16-204ENST00000399976 FANCEQ9HB96 536 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 FAM53CQ9NYF3 392 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 PILRAQ9UKJ1 303 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 AP1M2Q9Y6Q5 423 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 SPAARA0A1B0GVQ0 90 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 BTN3A3O00478 584 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 H2AFYO75367 372 aaKnown RBP7.26□□□□□ -1.25
USP16-204ENST00000399976 CCDC166P0CW27 439 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 PCSK2P16519 638 aa7.26□□□□□ -1.25
USP16-204ENST00000399976 CXCR2P25025 360 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms