RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 TSPAN33Q86UF1 283 aa11.1□□□□□ -0.63
C4orf3-201ENST00000399075 EID3Q8N140 333 aa11.1□□□□□ -0.63
C4orf3-201ENST00000399075 FNDC8Q8TC99 324 aa11.1□□□□□ -0.63
C4orf3-201ENST00000399075 TBC1D20Q96BZ9 403 aa11.1□□□□□ -0.63
C4orf3-201ENST00000399075 REXO5Q96IC2 774 aaKnown RBP11.1□□□□□ -0.63
C4orf3-201ENST00000399075 PARVBQ9HBI1 364 aa11.1□□□□□ -0.63
C4orf3-201ENST00000399075 TRPV5Q9NQA5 729 aa11.1□□□□□ -0.63
C4orf3-201ENST00000399075 ARL15Q9NXU5 204 aa11.1□□□□□ -0.63
C4orf3-201ENST00000399075 FAF1Q9UNN5 650 aaPredicted RBP11.1□□□□□ -0.63
C4orf3-201ENST00000399075 PCDHB14Q9Y5E9 798 aa11.1□□□□□ -0.63
C4orf3-201ENST00000399075 HEMK1Q9Y5R4 338 aaPredicted RBP11.1□□□□□ -0.63
C4orf3-201ENST00000399075 MAGED1Q9Y5V3 778 aaPredicted RBP11.1□□□□□ -0.63
C4orf3-201ENST00000399075 SH3PXD2BA1X283 911 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 SLC16A5O15375 505 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 TPPPO94811 219 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 PDYNP01213 254 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 GSTT2P0CG29 244 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 GSTT2BP0CG30 244 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 MPC1LP0DKB6 136 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 AOAHP28039 575 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 PTPN6P29350 595 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 POLR2IP36954 125 aaKnown RBP11.09□□□□□ -0.63
C4orf3-201ENST00000399075 STT3AP46977 705 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 SLC6A12P48065 614 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 PHC1P78364 1004 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 SLC7A9P82251 487 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 B4GALNT1Q00973 533 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 ABHD18Q0P651 414 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 NEDD8Q15843 81 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 XAF1Q6GPH4 301 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 MBOAT1Q6ZNC8 495 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 SLC39A11Q8N1S5 342 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 BEND7Q8N7W2 519 aaPredicted RBP11.09□□□□□ -0.63
C4orf3-201ENST00000399075 PPP1R14BQ96C90 147 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 FAM120BQ96EK7 910 aaKnown RBP11.09□□□□□ -0.63
C4orf3-201ENST00000399075 SCLYQ96I15 445 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 DCUN1D5Q9BTE7 237 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 C3orf18Q9UK00 162 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 TSC22D4Q9Y3Q8 395 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 PER2O15055 1255 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 DNAJB5O75953 348 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 OR56A5P0C7T3 313 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 BMP1P13497 986 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 CCR7P32248 378 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 MAGEA2P43356 314 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 GALK1P51570 392 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 ZNF33BQ06732 778 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 CLPPQ16740 277 aaPredicted RBP11.09□□□□□ -0.63
C4orf3-201ENST00000399075 LRRC66Q68CR7 880 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 KLHL35Q6PF15 583 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 GCNT7Q6ZNI0 430 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 ZNF554Q86TJ5 538 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 HIPK1Q86Z02 1210 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 CHDHQ8NE62 594 aaPredicted RBP11.09□□□□□ -0.63
C4orf3-201ENST00000399075 RAB2BQ8WUD1 216 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 SELENOMQ8WWX9 145 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 THAP11Q96EK4 314 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 TMEM169Q96HH4 297 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 FCRL1Q96LA6 429 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 ZNF558Q96NG5 402 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 TBCDQ9BTW9 1192 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 AMBRA1Q9C0C7 1298 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 FANCEQ9HB96 536 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 MRPL17Q9NRX2 175 aaKnown RBP11.09□□□□□ -0.63
C4orf3-201ENST00000399075 DLGAP4Q9Y2H0 992 aa11.09□□□□□ -0.63
C4orf3-201ENST00000399075 GNGT2O14610 69 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 URODP06132 367 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 EEF1B2P24534 225 aaKnown RBP11.08□□□□□ -0.64
C4orf3-201ENST00000399075 DCTP40126 519 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 ENTPD1P49961 510 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 CPSF6Q16630 551 aaKnown RBP eCLIP11.08□□□□□ -0.64
C4orf3-201ENST00000399075 GTDC1Q4AE62 458 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 C6orf141Q5SZD1 244 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.08□□□□□ -0.641e-7■□□□□ 10.4
C4orf3-201ENST00000399075 UBE2R2Q712K3 238 aaPredicted RBP11.08□□□□□ -0.64
C4orf3-201ENST00000399075 ELMOD1Q8N336 334 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 ASB11Q8WXH4 323 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 BHMTQ93088 406 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 NCLNQ969V3 563 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 LMLNQ96KR4 655 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 CPEB1Q9BZB8 566 aaKnown RBP11.08□□□□□ -0.64
C4orf3-201ENST00000399075 ELOVL6Q9H5J4 265 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 SMURF2Q9HAU4 748 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 SLC6A13Q9NSD5 602 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 INTS6Q9UL03 887 aaKnown RBP11.08□□□□□ -0.64
C4orf3-201ENST00000399075 HS3ST2Q9Y278 367 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 NAALAD2Q9Y3Q0 740 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 PCDHGA8Q9Y5G5 932 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 DENND4CQ5VZ89 1909 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 A0A1W2PPW3 197 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 SLC16A6O15403 523 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 SRCP12931 536 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 ENDOUP21128 410 aaKnown RBP11.08□□□□□ -0.64
C4orf3-201ENST00000399075 CD70P32970 193 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 HALP42357 657 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 RAB15P59190 212 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 DPY19L1Q2PZI1 675 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 ATP13A5Q4VNC0 1218 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 PLEKHS1Q5SXH7 462 aa11.08□□□□□ -0.64
C4orf3-201ENST00000399075 GTF2IRD2BQ6EKJ0 949 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms