RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ACTRT2Q8TDY3 377 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 CCT6BQ92526 530 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 ATP6V1E2Q96A05 226 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 MAGEB10Q96LZ2 347 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 LRRC37BQ96QE4 947 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 OR52B2Q96RD2 323 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 FERD3LQ96RJ6 166 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 CCT7Q99832 543 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 SLC29A3Q9BZD2 475 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 KIR3DX1Q9H7L2 352 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 TCF7L2Q9NQB0 619 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 ZNF624Q9P2J8 865 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 LNPEPQ9UIQ6 1025 aa18.88■□□□□ 0.61
PDLIM2-205ENST00000397761 KCNE1BA0A087WTH5 132 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 ZNF839A8K0R7 811 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 SKAP2O75563 359 aaPredicted RBP18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 CLDN9O95484 217 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 CAPN1P07384 714 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 HGFP14210 728 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 AFF3P51826 1226 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 IFT88Q13099 833 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 PRKG2Q13237 762 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 SPDYAQ5MJ70 313 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 FAM219BQ5XKK7 198 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 MTDHQ86UE4 582 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 ALYREFQ86V81 257 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 FBXL6Q8N531 539 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 CDYL2Q8N8U2 506 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 PPFIBP2Q8ND30 876 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 SETD7Q8WTS6 366 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 C19orf60Q96EN9 201 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 MED8Q96G25 268 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 MIPEPQ99797 713 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 LRRC61Q9BV99 259 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 RAB11FIP5Q9BXF6 653 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 WDR55Q9H6Y2 383 aaPredicted RBP18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 CAAP1Q9H8G2 361 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 TAAR2Q9P1P5 351 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 APOBEC3BQ9UH17 382 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 TDRKHQ9Y2W6 561 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 FIS1Q9Y3D6 152 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 TIMM22Q9Y584 194 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 COLEC10Q9Y6Z7 277 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 CABIN1Q9Y6J0 2220 aa18.87■□□□□ 0.61
PDLIM2-205ENST00000397761 SERPINA6P08185 405 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 NPPBP16860 134 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 JUNDP17535 347 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 EPHA3P29320 983 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 PKLRP30613 574 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 RAB28P51157 221 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 FASTKQ14296 549 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 TBCCQ15814 346 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 LSM12Q3MHD2 195 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 ZNF542PQ5EBM4 170 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 XKR7Q5GH72 579 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 IYDQ6PHW0 289 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 ACAD11Q709F0 780 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 DCBLD1Q8N8Z6 715 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 METTL6Q8TCB7 284 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 ZFPM2Q8WW38 1151 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 WDR34Q96EX3 536 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 RILPQ96NA2 401 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 IL17FQ96PD4 163 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 TWSG1Q9GZX9 223 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 ACTR8Q9H981 624 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 CCDC177Q9NQR7 707 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 PLAGL1Q9UM63 463 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 RNF11Q9Y3C5 154 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 KCNE2Q9Y6J6 123 aa18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 ATXN2Q99700 1313 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-205ENST00000397761 OR5K4A6NMS3 321 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 PIP5K1BO14986 540 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 CCDC22O60826 627 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 CRCPO75575 148 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 CHEK2O96017 543 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 CELA2BP08218 269 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 XRCC1P18887 633 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 GNAZP19086 355 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 SLC19A1P41440 591 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 ZNF528Q3MIS6 628 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 PLK5Q496M5 336 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 LIPJQ5W064 366 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 LYSMD4Q5XG99 296 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 LCTLQ6UWM7 567 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 LARP4Q71RC2 724 aaKnown RBP eCLIP18.85■□□□□ 0.616e-7■■□□□ 13.2
PDLIM2-205ENST00000397761 ZNF771Q7L3S4 317 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 ARMCX6Q7L4S7 300 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 YTHDF3Q7Z739 585 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 CLNKQ7Z7G1 428 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 GBP7Q8N8V2 638 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 OR2L8Q8NGY9 312 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 CEP70Q8NHQ1 597 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 SMPDL3AQ92484 453 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 ZC3H10Q96K80 434 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 C3orf30Q96M34 536 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 NMUR2Q9GZQ4 415 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 EHD1Q9H4M9 534 aa18.85■□□□□ 0.61
PDLIM2-205ENST00000397761 KIR2DS5A0A0G2JLQ3 304 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 A0A0G2JNG1 304 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 GOLGA8QA0A0J9YX86 632 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms