RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 SPATA5L1Q9BVQ7 753 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ANKHQ9HCJ1 492 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 C6orf203Q9P0P8 240 aaPredicted RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 MTCH2Q9Y6C9 303 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 DGKBQ9Y6T7 804 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 HNRNPRO43390 633 aaKnown RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 MBTPS2O43462 519 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 TOP3BO95985 862 aaKnown RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 CR2P20023 1033 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 RRM2P31350 389 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 CCT8P50990 548 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 FCHO2Q0JRZ9 810 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 C9orf64Q5T6V5 341 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ABHD13Q7L211 337 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 TMEM150AQ86TG1 271 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 DENND6BQ8NEG7 585 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 DDHD1Q8NEL9 900 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 METTL21AQ8WXB1 218 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 RGMAQ96B86 450 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 PTCD3Q96EY7 689 aaKnown RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ZNF382Q96SR6 550 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 RTKNQ9BST9 563 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ZNF232Q9UNY5 417 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 OR10H1Q9Y4A9 318 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 OAS3Q9Y6K5 1087 aaKnown RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 GON4LQ3T8J9 2241 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 VARSP26640 1264 aaKnown RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 SRP54P61011 504 aaKnown RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 SRSF11Q05519 484 aaKnown RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 TMEM52BQ4KMG9 183 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ZNF542PQ5EBM4 170 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ZNF789Q5FWF6 425 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 SUSD1Q6UWL2 747 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 GCNT7Q6ZNI0 430 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 BNIPLQ7Z465 357 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 LIX1Q8N485 282 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 CD200R1Q8TD46 325 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 CLIP3Q96DZ5 547 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 SMIM14Q96QK8 99 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 CDX2Q99626 313 aaPredicted RBP8.06□□□□□ -1.12
PTPRD-204ENST00000397606 DCLRE1BQ9H816 532 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ATXN10Q9UBB4 475 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 ANGPT4Q9Y264 503 aa8.06□□□□□ -1.12
PTPRD-204ENST00000397606 A0A0J9YVX5 310 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 H7C0S8 307 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 I6L893 689 aaPredicted RBP8.05□□□□□ -1.12
PTPRD-204ENST00000397606 SLC22A2O15244 555 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 TYRP1P17643 537 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 CD38P28907 300 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 SLC25A3Q00325 362 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 CDKL4Q5MAI5 379 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 TCHHL1Q5QJ38 904 aaPredicted RBP8.05□□□□□ -1.12
PTPRD-204ENST00000397606 C16orf62Q7Z3J2 963 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 OR4A15Q8NGL6 344 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 DENND1AQ8TEH3 1009 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 PROX1Q92786 737 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 SLC12A9Q9BXP2 914 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 DNAAF2Q9NVR5 837 aaKnown RBP8.05□□□□□ -1.12
PTPRD-204ENST00000397606 PLAGL1Q9UM63 463 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 PRPF19Q9UMS4 504 aaKnown RBP8.05□□□□□ -1.12
PTPRD-204ENST00000397606 TMED5Q9Y3A6 229 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 SNX13Q9Y5W8 968 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 SDK1Q7Z5N4 2213 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 ITM2AO43736 263 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 PCDH7O60245 1069 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 IL6P05231 212 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 POLR2CP19387 275 aaPredicted RBP8.05□□□□□ -1.12
PTPRD-204ENST00000397606 CLDN2P57739 230 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 CYP4F3Q08477 520 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 NFATC4Q14934 902 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 RFTN2Q52LD8 501 aaPredicted RBP8.05□□□□□ -1.12
PTPRD-204ENST00000397606 TBCELQ5QJ74 424 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 WASHC2DQ5SRD0 308 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 TMEM164Q5U3C3 297 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 LIPJQ5W064 366 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 NEK10Q6ZWH5 1172 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 AMIGO1Q86WK6 493 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 CDH22Q9UJ99 828 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 FBXW2Q9UKT8 454 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 MANBAO00462 879 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 ZSCAN9O15535 394 aaPredicted RBP8.05□□□□□ -1.12
PTPRD-204ENST00000397606 CYP7B1O75881 506 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 PDE5AO76074 875 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 TGFB1P01137 390 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 PRLP01236 227 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 CPN2P22792 545 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 ARCN1P48444 511 aaKnown RBP8.05□□□□□ -1.12
PTPRD-204ENST00000397606 RAB28P51157 221 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 PTSQ03393 145 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 BNIP2Q12982 314 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 HTR4Q13639 388 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 LRRC36Q1X8D7 754 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 MINDY4Q4G0A6 757 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 ZFP1Q6P2D0 407 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 NATD1Q8N6N6 113 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 NRBF2Q96F24 287 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 PLEKHA8Q96JA3 519 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 TRPV4Q9HBA0 871 aa8.05□□□□□ -1.12
PTPRD-204ENST00000397606 DDX18Q9NVP1 670 aaKnown RBP8.05□□□□□ -1.12
PTPRD-204ENST00000397606 CHCHD3Q9NX63 227 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms