RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 OR4F21O95013 312 aa20.53■□□□□ 0.88
CPNE1-204ENST00000397443 PDCD2Q16342 344 aaPredicted RBP20.53■□□□□ 0.88
CPNE1-204ENST00000397443 DUOXA1Q1HG43 343 aa20.53■□□□□ 0.88
CPNE1-204ENST00000397443 CAPN13Q6MZZ7 669 aaPredicted RBP20.53■□□□□ 0.88
CPNE1-204ENST00000397443 OR4E2Q8NGC2 313 aa20.53■□□□□ 0.88
CPNE1-204ENST00000397443 PRR11Q96HE9 360 aaPredicted RBP20.53■□□□□ 0.88
CPNE1-204ENST00000397443 OR4K3Q96R72 315 aa20.53■□□□□ 0.88
CPNE1-204ENST00000397443 CCDC177Q9NQR7 707 aaPredicted RBP20.53■□□□□ 0.88
CPNE1-204ENST00000397443 ICKQ9UPZ9 632 aa20.53■□□□□ 0.88
CPNE1-204ENST00000397443 SNX3O60493 162 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 SKAP2O75563 359 aaPredicted RBP20.52■□□□□ 0.88
CPNE1-204ENST00000397443 ANXA6P08133 673 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 EPORP19235 508 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 ARRB1P49407 418 aaPredicted RBP20.52■□□□□ 0.88
CPNE1-204ENST00000397443 AQP5P55064 265 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 MAZP56270 477 aaKnown RBP20.52■□□□□ 0.88
CPNE1-204ENST00000397443 ERVPABLB-1P60509 514 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 GABPB1Q06547 395 aaPredicted RBP20.52■□□□□ 0.88
CPNE1-204ENST00000397443 TRIM61Q5EBN2 209 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 VWA5B1Q5TIE3 1220 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 LETMD1Q6P1Q0 360 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 WDR75Q8IWA0 830 aaKnown RBP20.52■□□□□ 0.88
CPNE1-204ENST00000397443 SFRP1Q8N474 314 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 RAB42Q8N4Z0 105 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 CDYL2Q8N8U2 506 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 LINC01555Q8NAE3 123 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 OR4F6Q8NGB9 312 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 OR2I1PQ8NGU4 316 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 LCN9Q8WX39 176 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 KIR3DX1Q9H7L2 352 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 ERVMER34-1Q9H9K5 563 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 TRAF6Q9Y4K3 522 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 TIMM22Q9Y584 194 aa20.52■□□□□ 0.88
CPNE1-204ENST00000397443 PCM1Q15154 2024 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 PSMB5P28074 263 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 NDUFS1P28331 727 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 RAB28P51157 221 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 GALNT1Q10472 559 aaPredicted RBP20.51■□□□□ 0.87
CPNE1-204ENST00000397443 CDC16Q13042 620 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 TRAF3Q13114 568 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 GPR18Q14330 331 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 HLA-BQ31612 363 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 GKAP1Q5VSY0 366 aaPredicted RBP20.51■□□□□ 0.87
CPNE1-204ENST00000397443 MILR1Q7Z6M3 343 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 LRRC56Q8IYG6 542 aaPredicted RBP20.51■□□□□ 0.87
CPNE1-204ENST00000397443 GRAMD1AQ96CP6 724 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 ZNF382Q96SR6 550 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 ACTR8Q9H981 624 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 IL21RQ9HBE5 538 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 SLC40A1Q9NP59 571 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 SH2B3Q9UQQ2 575 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 USH1CQ9Y6N9 552 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 KIR2DS5A0A0G2JLQ3 304 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 A0A0G2JNG1 304 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 LMO7DNF2Z398 122 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 KIR2DS3K7RE56 304 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 CLGNO14967 610 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 TGDSO95455 350 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 ESRRBO95718 433 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 OTCP00480 354 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 JUNP05412 331 aaKnown RBP20.51■□□□□ 0.87
CPNE1-204ENST00000397443 PKLRP30613 574 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 PIK3CGP48736 1102 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 NAA20P61599 178 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 KIR2DS5Q14953 304 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 SHBQ15464 509 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 PEAR1Q5VY43 1037 aaPredicted RBP20.51■□□□□ 0.87
CPNE1-204ENST00000397443 MAVSQ7Z434 540 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 PIGWQ7Z7B1 504 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 GATAD2AQ86YP4 633 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 NUF2Q9BZD4 464 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 ARRDC1-AS1Q9H2J1 176 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.51■□□□□ 0.87
CPNE1-204ENST00000397443 SPATA7Q9P0W8 599 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 RNF11Q9Y3C5 154 aa20.51■□□□□ 0.87
CPNE1-204ENST00000397443 OR5K4A6NMS3 321 aa20.5■□□□□ 0.87
CPNE1-204ENST00000397443 E7EQ34 232 aa20.5■□□□□ 0.87
CPNE1-204ENST00000397443 AZIN1O14977 448 aa20.5■□□□□ 0.87
CPNE1-204ENST00000397443 RRP9O43818 475 aaKnown RBP20.5■□□□□ 0.87
CPNE1-204ENST00000397443 SLC2A4P14672 509 aa20.5■□□□□ 0.87
CPNE1-204ENST00000397443 XRCC1P18887 633 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-204ENST00000397443 YBX1P67809 324 aaKnown RBP20.5■□□□□ 0.87
CPNE1-204ENST00000397443 HHEXQ03014 270 aa20.5■□□□□ 0.87
CPNE1-204ENST00000397443 CYP2A13Q16696 494 aa20.5■□□□□ 0.87
CPNE1-204ENST00000397443 TCHHL1Q5QJ38 904 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-204ENST00000397443 METTL2BQ6P1Q9 378 aaKnown RBP20.5■□□□□ 0.87
CPNE1-204ENST00000397443 SLC25A45Q8N413 288 aa20.5■□□□□ 0.87
CPNE1-204ENST00000397443 MAPK15Q8TD08 544 aa20.5■□□□□ 0.87
CPNE1-204ENST00000397443 KLHL14Q9P2G3 628 aa20.5■□□□□ 0.87
CPNE1-204ENST00000397443 TAC3Q9UHF0 121 aa20.5■□□□□ 0.87
CPNE1-204ENST00000397443 HAO1Q9UJM8 370 aa20.5■□□□□ 0.87
CPNE1-204ENST00000397443 GMEB2Q9UKD1 530 aa20.5■□□□□ 0.87
CPNE1-204ENST00000397443 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-204ENST00000397443 FFAR3O14843 346 aa20.49■□□□□ 0.87
CPNE1-204ENST00000397443 HGSO14964 777 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-204ENST00000397443 GPR42O15529 346 aa20.49■□□□□ 0.87
CPNE1-204ENST00000397443 ERGP11308 486 aa20.49■□□□□ 0.87
CPNE1-204ENST00000397443 NPPBP16860 134 aa20.49■□□□□ 0.87
CPNE1-204ENST00000397443 UBE2IP63279 158 aaKnown RBP20.49■□□□□ 0.87
CPNE1-204ENST00000397443 BIRC2Q13490 618 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms