RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 OR6C2Q9NZP2 312 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 MARCOQ9UEW3 520 aaPredicted RBP13.27□□□□□ -0.28
VAPB-202ENST00000395802 ZDHHC2Q9UIJ5 367 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 DCTN4Q9UJW0 460 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 RAB23Q9ULC3 237 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 DYRK1BQ9Y463 629 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 LRP4O75096 1905 aa13.27□□□□□ -0.28
VAPB-202ENST00000395802 ZFC3H1O60293 1989 aaKnown RBP13.27□□□□□ -0.29
VAPB-202ENST00000395802 A0A0G2JND7 137 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 CCT8L1PA6NM43 557 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 MATN2O00339 956 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 CLDN9O95484 217 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 UROSP10746 265 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 ARFIP2P53365 341 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 TBPL1P62380 186 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 BIRC2Q13490 618 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 KIF19Q2TAC6 998 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 THEMIS2Q5TEJ8 643 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 PRR23BQ6ZRT6 265 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 SFRP1Q8N474 314 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 ZNF548Q8NEK5 533 aaPredicted RBP13.27□□□□□ -0.29
VAPB-202ENST00000395802 MAPK15Q8TD08 544 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 STON2Q8WXE9 905 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 SLC22A18Q96BI1 424 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 PYCR2Q96C36 320 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 PRRX2Q99811 253 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 SGPP1Q9BX95 441 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 NUSAP1Q9BXS6 441 aaKnown RBP13.27□□□□□ -0.29
VAPB-202ENST00000395802 ACTR8Q9H981 624 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 ZBTB26Q9HCK0 441 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 CPNE7Q9UBL6 633 aa13.27□□□□□ -0.29
VAPB-202ENST00000395802 FAM221BA6H8Z2 402 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 LRRC14BA6NHZ5 514 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 PIAS2O75928 621 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 SYPP08247 313 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 ALOX15P16050 662 aaPredicted RBP13.26□□□□□ -0.29
VAPB-202ENST00000395802 MPSTP25325 297 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 AQP5P55064 265 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 PCDH1Q08174 1060 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 C1orf61Q13536 156 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 GRB7Q14451 532 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 TCEA2Q15560 299 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 C18orf21Q32NC0 220 aaPredicted RBP13.26□□□□□ -0.29
VAPB-202ENST00000395802 LIPJQ5W064 366 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 OR52E1Q8NGJ3 308 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 OR2L8Q8NGY9 312 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 AGR3Q8TD06 166 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 LCN9Q8WX39 176 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 MOCOSQ96EN8 888 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.26□□□□□ -0.29
VAPB-202ENST00000395802 SLC40A1Q9NP59 571 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 ACSS2Q9NR19 701 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 TMEM74BQ9NUR3 256 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 MRGBPQ9NV56 204 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 INTS7Q9NVH2 962 aaKnown RBP13.26□□□□□ -0.29
VAPB-202ENST00000395802 PNPOQ9NVS9 261 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 SCHIP1Q9P0W5 487 aaPredicted RBP13.26□□□□□ -0.29
VAPB-202ENST00000395802 ZNF624Q9P2J8 865 aaPredicted RBP13.26□□□□□ -0.29
VAPB-202ENST00000395802 TRPS1Q9UHF7 1281 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 ASB1Q9Y576 335 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 PCDHGA5Q9Y5G8 931 aa13.26□□□□□ -0.29
VAPB-202ENST00000395802 UBFD1O14562 309 aaKnown RBP13.25□□□□□ -0.29
VAPB-202ENST00000395802 YY2O15391 372 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 HGFP14210 728 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 TSPAN8P19075 237 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 SLC19A1P41440 591 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 IRF8Q02556 426 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 TSTA3Q13630 321 aaPredicted RBP13.25□□□□□ -0.29
VAPB-202ENST00000395802 PLCL1Q15111 1095 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 GGTA1PQ4G0N0 100 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 PAGE2BQ5JRK9 111 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 C10orf62Q5T681 223 aaPredicted RBP13.25□□□□□ -0.29
VAPB-202ENST00000395802 DUS1LQ6P1R4 473 aaKnown RBP13.25□□□□□ -0.29
VAPB-202ENST00000395802 LCTLQ6UWM7 567 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 AMIGO1Q86WK6 493 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 FITM2Q8N6M3 262 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 METTL6Q8TCB7 284 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 DUSP23Q9BVJ7 150 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 TMEM120AQ9BXJ8 343 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 SHCBP1LQ9BZQ2 653 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 EHD1Q9H4M9 534 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 PCDHB11Q9Y5F2 797 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 SNX11Q9Y5W9 270 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 OR7A17O14581 309 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 VPS4BO75351 444 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 CCNDBP1O95273 360 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 CER1O95813 267 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 KRT6AP02538 564 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 KRT6BP04259 564 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 CFIP05156 583 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 ALPPL2P10696 532 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 HMOX2P30519 316 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 PKLRP30613 574 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 HNF4AP41235 474 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 CCR10P46092 362 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 KRT6CP48668 564 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 HHEXQ03014 270 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 ZNF33BQ06732 778 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 LAPTM5Q13571 262 aa13.25□□□□□ -0.29
VAPB-202ENST00000395802 TBCCQ15814 346 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms