RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ZNF382Q96SR6 550 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 PARVBQ9HBI1 364 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 FBXO8Q9NRD0 319 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 ELOVL2Q9NXB9 296 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 MBLAC1A4D2B0 266 aaPredicted RBP13.97□□□□□ -0.17
CLIP2-203ENST00000395060 C2orf81A6NN90 581 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 LOC730098B7Z3J9 87 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 NTRK1P04629 796 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 CHRM5P08912 532 aaPredicted RBP13.97□□□□□ -0.17
CLIP2-203ENST00000395060 ARHGDIAP52565 204 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 RPP38P78345 283 aaKnown RBP13.97□□□□□ -0.17
CLIP2-203ENST00000395060 SERINC3Q13530 473 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 PTRHD1Q6GMV3 140 aaKnown RBP13.97□□□□□ -0.17
CLIP2-203ENST00000395060 EFL1Q7Z2Z2 1120 aaKnown RBP13.97□□□□□ -0.17
CLIP2-203ENST00000395060 C17orf50Q8WW18 174 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 ACBD6Q9BR61 282 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 TTYH2Q9BSA4 534 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 COPS4Q9BT78 406 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 HEBP1Q9NRV9 189 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 C1orf109Q9NX04 203 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 ADPRHL2Q9NX46 363 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 FFAR2O15552 330 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 NUAK1O60285 661 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 ULK1O75385 1050 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 NDST3O95803 873 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 S100A5P33763 92 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 TAB1Q15750 504 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 FAM171A1Q5VUB5 890 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 NXNL2Q5VZ03 156 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 OR4F3Q6IEY1 312 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 FAM171BQ6P995 826 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 ZNF551Q7Z340 670 aaPredicted RBP13.97□□□□□ -0.17
CLIP2-203ENST00000395060 HIPK1Q86Z02 1210 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 TCAIMQ8N3R3 496 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 OR8J3Q8NGG0 315 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 CENPOQ9BU64 300 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 CINPQ9BW66 212 aaPredicted RBP13.97□□□□□ -0.17
CLIP2-203ENST00000395060 CIPCQ9C0C6 399 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 NACA2Q9H009 215 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 PLSCR3Q9NRY6 295 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 GPR83Q9NYM4 423 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 TBC1D14Q9P2M4 693 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 ITGB1BP2Q9UKP3 347 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 NOD1Q9Y239 953 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 SMIM30A4D0T7 59 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 ANKRD34BA5PLL1 514 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 STX16O14662 325 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 OPN1SWP03999 348 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 ALPIP09923 528 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 OGNP20774 298 aaKnown RBP13.96□□□□□ -0.17
CLIP2-203ENST00000395060 CA5AP35218 305 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 ZNF157P51786 506 aaPredicted RBP13.96□□□□□ -0.17
CLIP2-203ENST00000395060 EIF4EBP2Q13542 120 aaPredicted RBP13.96□□□□□ -0.17
CLIP2-203ENST00000395060 TIGD6Q17RP2 521 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 CACHD1Q5VU97 1274 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 AFTPHQ6ULP2 937 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 ZNF621Q6ZSS3 439 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 GDPD3Q7L5L3 318 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 SVOPQ8N4V2 548 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 TTPALQ9BTX7 342 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 LRTM1Q9HBL6 345 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 EXOSC4Q9NPD3 245 aaKnown RBP13.96□□□□□ -0.17
CLIP2-203ENST00000395060 MARCH2Q9P0N8 246 aa13.96□□□□□ -0.17
CLIP2-203ENST00000395060 PDZK1P1A8MUH7 402 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 CTDSP2O14595 271 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 TLL1O43897 1013 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 MGEA5O60502 916 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 CD52P31358 61 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 PBX3P40426 434 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 DDX39BQ13838 428 aaKnown RBP13.96□□□□□ -0.18
CLIP2-203ENST00000395060 OR2T5Q6IEZ7 315 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 NEK10Q6ZWH5 1172 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 THEM5Q8N1Q8 247 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 ATP6V0D2Q8N8Y2 350 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 OR2T29Q8NH02 315 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 LKAAEAR1Q8TD35 194 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 PHF10Q8WUB8 498 aaKnown RBP13.96□□□□□ -0.18
CLIP2-203ENST00000395060 MAL2Q969L2 176 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 CCSER2Q9H7U1 834 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 TRIM39Q9HCM9 518 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 PRDM5Q9NQX1 630 aaPredicted RBP13.96□□□□□ -0.18
CLIP2-203ENST00000395060 RNF6Q9Y252 685 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 PLXNB2O15031 1838 aa13.96□□□□□ -0.18
CLIP2-203ENST00000395060 MKI67P46013 3256 aaKnown RBP13.95□□□□□ -0.18
CLIP2-203ENST00000395060 ILVBLA1L0T0 632 aa13.95□□□□□ -0.18
CLIP2-203ENST00000395060 AGAP5A6NIR3 686 aa13.95□□□□□ -0.18
CLIP2-203ENST00000395060 TNFRSF10BO14763 440 aa13.95□□□□□ -0.18
CLIP2-203ENST00000395060 STSP08842 583 aa13.95□□□□□ -0.18
CLIP2-203ENST00000395060 SLC10A3P09131 477 aa13.95□□□□□ -0.18
CLIP2-203ENST00000395060 S100A3P33764 101 aa13.95□□□□□ -0.18
CLIP2-203ENST00000395060 TGFBR2P37173 567 aa13.95□□□□□ -0.18
CLIP2-203ENST00000395060 ZNF140P52738 457 aaPredicted RBP13.95□□□□□ -0.18
CLIP2-203ENST00000395060 MAD2L1BPQ15013 274 aaPredicted RBP13.95□□□□□ -0.18
CLIP2-203ENST00000395060 ACOX1Q15067 660 aa13.95□□□□□ -0.18
CLIP2-203ENST00000395060 TYSND1Q2T9J0 566 aa13.95□□□□□ -0.18
CLIP2-203ENST00000395060 RUNDC3AQ59EK9 446 aa13.95□□□□□ -0.18
CLIP2-203ENST00000395060 SYT6Q5T7P8 510 aaPredicted RBP13.95□□□□□ -0.18
CLIP2-203ENST00000395060 ARMC12Q5T9G4 340 aa13.95□□□□□ -0.18
CLIP2-203ENST00000395060 SETD9Q8NE22 299 aa13.95□□□□□ -0.18
CLIP2-203ENST00000395060 NEDD4LQ96PU5 975 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms