RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TAPBPO15533 448 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 BCKDHAP12694 445 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 SLC6A2P23975 617 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 SELPLGQ14242 412 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 CRIPAKQ8N1N5 446 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 HIC2Q96JB3 615 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 C12orf66Q96MD2 445 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 CGREF1Q99674 301 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 HOPXQ9BPY8 73 aaPredicted RBP15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 ASPSCR1Q9BZE9 553 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 TMEM245Q9H330 911 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 BATF3Q9NR55 127 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 SCHIP1Q9P0W5 487 aaPredicted RBP15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 RPL26L1Q9UNX3 145 aaKnown RBP15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 MAP4K5Q9Y4K4 846 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 KNTC1P50748 2209 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 TRPM6Q9BX84 2022 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 MAGEB17A8MXT2 336 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 CST1P01037 141 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 DNTTP04053 509 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 CCT8P50990 548 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 RPS13P62277 151 aaKnown RBP15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 MAP7Q14244 749 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 PCBP2Q15366 365 aaKnown RBP eCLIP15.47■□□□□ 0.073e-7■■■■■ 30.4
SMARCD1-202ENST00000394963 FAM98BQ52LJ0 330 aaKnown RBP15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 SLC30A9Q6PML9 568 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 CCDC81Q6ZN84 652 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 BTN2A2Q8WVV5 523 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 TRMT61BQ9BVS5 477 aaKnown RBP15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 SORBS1Q9BX66 1292 aaKnown RBP15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 MAP10Q9P2G4 905 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 OARD1Q9Y530 152 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 LRRC42Q9Y546 428 aa15.47■□□□□ 0.07
SMARCD1-202ENST00000394963 RALGAPA2Q2PPJ7 1873 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 CACNA1IQ9P0X4 2223 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 FEZF1A0PJY2 475 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 HTRA2O43464 458 aaPredicted RBP15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 FZD6O60353 706 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 MAN1A2O60476 641 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 BCAS2O75934 225 aaPredicted RBP15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 NR4A1P22736 598 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 RPL26P61254 145 aaKnown RBP15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 PWP1Q13610 501 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 DOC2AQ14183 400 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 PRAMEF14Q5SWL7 426 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 MPP7Q5T2T1 576 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 CAPN13Q6MZZ7 669 aaPredicted RBP15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 BLOC1S3Q6QNY0 202 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 AMZ2Q86W34 360 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 LILRA2Q8N149 483 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 ZNF740Q8NDX6 193 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 PROKR1Q8TCW9 393 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 VWCEQ96DN2 955 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 RSPRY1Q96DX4 576 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 SLC29A1Q99808 456 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 DCUN1D5Q9BTE7 237 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 ARMC7Q9H6L4 198 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 POPDC3Q9HBV1 291 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 AIG1Q9NVV5 245 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 PTPRZ1P23471 2315 aaPredicted RBP15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 MICAL3Q7RTP6 2002 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 ARHGEF33A8MVX0 844 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 H7BY64 318 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 FAM58BPP0C7Q3 252 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 RUNX3Q13761 415 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 CLECL1Q8IZS7 167 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 TMEM132CQ8N3T6 1108 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 HMGB4Q8WW32 186 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 TFGQ92734 400 aaPredicted RBP15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 PRAP1Q96NZ9 151 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 VAPAQ9P0L0 249 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 C6orf203Q9P0P8 240 aaPredicted RBP15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 LZTS1Q9Y250 596 aa15.46■□□□□ 0.07
SMARCD1-202ENST00000394963 OR52A4PA6NMU1 304 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 KPNA5O15131 536 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 ADRB3P13945 408 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 ZNF8P17098 575 aaPredicted RBP15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 IL12AP29459 219 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 B4GALNT1Q00973 533 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 C2orf80Q0P641 193 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 MAD2L1Q13257 205 aaPredicted RBP15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 LRP8Q14114 963 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 HORMAD1Q86X24 394 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 FAM129CQ86XR2 697 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 CATSPER1Q8NEC5 780 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 OSCP1Q8WVF1 389 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 CCM2Q9BSQ5 444 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 INPP5KQ9BT40 448 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 MRGBPQ9NV56 204 aa15.46■□□□□ 0.06
SMARCD1-202ENST00000394963 FPGTO14772 594 aa15.45■□□□□ 0.06
SMARCD1-202ENST00000394963 LATS1O95835 1130 aa15.45■□□□□ 0.06
SMARCD1-202ENST00000394963 PXNP49023 591 aaPredicted RBP15.45■□□□□ 0.06
SMARCD1-202ENST00000394963 NEK5Q6P3R8 708 aa15.45■□□□□ 0.06
SMARCD1-202ENST00000394963 KBTBD6Q86V97 674 aa15.45■□□□□ 0.06
SMARCD1-202ENST00000394963 TRIM48Q8IWZ4 208 aa15.45■□□□□ 0.06
SMARCD1-202ENST00000394963 TERB1Q8NA31 727 aa15.45■□□□□ 0.06
SMARCD1-202ENST00000394963 ATG16L2Q8NAA4 619 aa15.45■□□□□ 0.06
SMARCD1-202ENST00000394963 OR5AR1Q8NGP9 310 aa15.45■□□□□ 0.06
SMARCD1-202ENST00000394963 CTPS2Q9NRF8 586 aa15.45■□□□□ 0.06
SMARCD1-202ENST00000394963 SUFUQ9UMX1 484 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms