RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TRAV19A0A0A6YYK7 116 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 H0YAE9 185 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 LEFTY2O00292 366 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 TULP3O75386 442 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 CREG1O75629 220 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 RFPL2O75678 378 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 INMTO95050 263 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 CPNE6O95741 557 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 ITGALP20701 1170 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 ALDH4A1P30038 563 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 DCTP40126 519 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 PLA2G16P53816 162 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 SPCS2Q15005 226 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 CARD16Q5EG05 197 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 PLPP4Q5VZY2 271 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 ADNP2Q6IQ32 1131 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 RETSATQ6NUM9 610 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 LILRA6Q6PI73 481 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 CEP68Q76N32 757 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 ERLEC1Q96DZ1 483 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 TCEAL4Q96EI5 215 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 ZBTB18Q99592 522 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 PLGRKTQ9HBL7 147 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 PFDN4Q9NQP4 134 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 TMEFF2Q9UIK5 374 aaPredicted RBP13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 TMPRSS11EQ9UL52 423 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 PDE10AQ9Y233 779 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 TRBV5-3A0A0A0MS03 114 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 KIAA0355O15063 1070 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 NPPAP01160 153 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 INHBBP09529 407 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 LHCGRP22888 699 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 DGKAP23743 735 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 EPHA2P29317 976 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 RGS4P49798 205 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 TPD52P55327 224 aaPredicted RBP13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 NAA20P61599 178 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 VAC14Q08AM6 782 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 NEK5Q6P3R8 708 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 CRTC1Q6UUV9 634 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 HTR3DQ70Z44 454 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 SNX29P2Q8IUI4 249 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 FAM217AQ8IXS0 508 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 MICU2Q8IYU8 434 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 C8orf59Q8N0T1 100 aaPredicted RBP13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 SLC15A4Q8N697 577 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 LMNTD1Q8N9Z9 388 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 MIPOL1Q8TD10 442 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 GIPC3Q8TF64 312 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 UBE2FQ969M7 185 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 DPH2Q9BQC3 489 aaPredicted RBP13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 BBS2Q9BXC9 721 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 ATG10Q9H0Y0 220 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 GORASP2Q9H8Y8 452 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 ARL15Q9NXU5 204 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 DNAJB9Q9UBS3 223 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 ABCG2Q9UNQ0 655 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 DOLKQ9UPQ8 538 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 HELZP42694 1942 aaKnown RBP13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 MTCL1Q9Y4B5 1905 aaKnown RBP13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 EFCAB14O75071 495 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 E2F6O75461 281 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 STK16O75716 305 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 SEC14L2O76054 403 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 ADH1AP07327 375 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 EPB42P16452 691 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 MAP4P27816 1152 aaKnown RBP13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 PTPN6P29350 595 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 GZMMP51124 257 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 SLC7A9P82251 487 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 SIM2Q14190 667 aaPredicted RBP13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 C6orf141Q5SZD1 244 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 LRRC66Q68CR7 880 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 OR4F3Q6IEY1 312 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 SPRED2Q7Z698 418 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 NXPE1Q8N323 547 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 BEND7Q8N7W2 519 aaPredicted RBP13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 CDC26Q8NHZ8 85 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 SDCCAG3Q96C92 435 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 APOLD1Q96LR9 279 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 CPPED1Q9BRF8 314 aaPredicted RBP13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 CCDC90BQ9GZT6 254 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 ASAH2Q9NR71 780 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 ABCB8Q9NUT2 735 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 SCN8AQ9UQD0 1980 aa13.13□□□□□ -0.31
GTF2F1-201ENST00000394456 SH3PXD2BA1X283 911 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 IFRD1O00458 451 aaPredicted RBP13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 TOR1BO14657 336 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 GMNNO75496 209 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 ZNF682O95780 498 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 HTR1BP28222 390 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 FMO3P31513 532 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 RPIAP49247 311 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 CCR3P51677 355 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 ILF2Q12905 390 aaKnown RBP13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 PLEKHG6Q3KR16 790 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 MPPE1Q53F39 396 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 GTF2IRD2BQ6EKJ0 949 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 GALNT18Q6P9A2 607 aa13.12□□□□□ -0.31
GTF2F1-201ENST00000394456 CERS6Q6ZMG9 384 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms