RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 STC2O76061 302 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 SNX4O95219 450 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 HGFP14210 728 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 FSHRP23945 695 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 ADRA1AP35348 466 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 ZFP36L2P47974 494 aaKnown RBP10.88□□□□□ -0.67
CUX1-204ENST00000393824 KCNK10P57789 538 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 OR4D2P58180 307 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 CXCR4P61073 352 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 SLC35A2P78381 396 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 MVKQ03426 396 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 HYAL1Q12794 435 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 GRIN2CQ14957 1233 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 TEAD2Q15562 447 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 TRIP4Q15650 581 aaPredicted RBP10.88□□□□□ -0.67
CUX1-204ENST00000393824 FUT11Q495W5 492 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 ALFQ53S48 1182 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 TCEAL5Q5H9L2 206 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 ZC3H12BQ5HYM0 836 aaKnown RBP10.88□□□□□ -0.67
CUX1-204ENST00000393824 BRMS1LQ5PSV4 323 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 ATAD3CQ5T2N8 411 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 MANEALQ5VSG8 457 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 FAM219BQ5XKK7 198 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 RAP1GAP2Q684P5 730 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 PLD3Q8IV08 490 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 DENND1CQ8IV53 801 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 LSMEM1Q8N8F7 131 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 ITFG1Q8TB96 612 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 TWIST2Q8WVJ9 160 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 KAT8Q9H7Z6 458 aaKnown RBP10.88□□□□□ -0.67
CUX1-204ENST00000393824 GLOD4Q9HC38 313 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 TMEM45AQ9NWC5 275 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 LEF1Q9UJU2 399 aaPredicted RBP10.88□□□□□ -0.67
CUX1-204ENST00000393824 DNMT3LQ9UJW3 386 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 USP22Q9UPT9 525 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 NUP205Q92621 2012 aa10.88□□□□□ -0.67
CUX1-204ENST00000393824 CENPXA8MT69 81 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 PDZK1P1A8MUH7 402 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 H3BMM5 538 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 AZIN1O14977 448 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 XPNPEP2O43895 674 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 MRPS14O60783 128 aaKnown RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 CDK14O94921 469 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 MFN2O95140 757 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 OLFM2O95897 454 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 TSPAN8P19075 237 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 HTR7P34969 479 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 HERVK_113P63132 956 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 GALK2Q01415 458 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 PRKCDQ05655 676 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 NPTX1Q15818 432 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 KANK2Q63ZY3 851 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 PRR23BQ6ZRT6 265 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 RNF135Q8IUD6 432 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 CFAP52Q8N1V2 620 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 OVCA2Q8WZ82 227 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 FIG4Q92562 907 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 MRPL38Q96DV4 380 aaKnown RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 ZHX1-C8orf76Q96EF9 292 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 TRIM62Q9BVG3 475 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 KLF16Q9BXK1 252 aaPredicted RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 ERVK-6Q9BXR3 956 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 NXF2Q9GZY0 626 aaKnown RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 SLA2Q9H6Q3 261 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 ASAH2Q9NR71 780 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 GIMAP2Q9UG22 337 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 MAFFQ9ULX9 164 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 TPRKBQ9Y3C4 175 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 MAU2Q9Y6X3 613 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 PRMT5O14744 637 aaPredicted RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 WISP3O95389 354 aaPredicted RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 PRAMEF12O95522 483 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 ANGPTL1O95841 491 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 ANXA6P08133 673 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 DDX5P17844 614 aaKnown RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 M6PRP20645 277 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 SOX11P35716 441 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 MLLT6P55198 1093 aaPredicted RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 RACK1P63244 317 aaKnown RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 SMAD3P84022 425 aaKnown RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 RBM20Q5T481 1227 aaKnown RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 ZCCHC8Q6NZY4 707 aaKnown RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 FBXL22Q6P050 247 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 OTOP3Q7RTS5 596 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 SPATA19Q7Z5L4 167 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 HID1Q8IV36 788 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 UBQLNLQ8IYU4 475 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 DTWD1Q8N5C7 304 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 FAM83FQ8NEG4 500 aaPredicted RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 GRPEL2Q8TAA5 225 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 TTC9Q92623 222 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 TUBGCP3Q96CW5 907 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 CELF6Q96J87 481 aaKnown RBP10.87□□□□□ -0.67
CUX1-204ENST00000393824 UGT2B28Q9BY64 529 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 TUBB1Q9H4B7 451 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 UBP1Q9NZI7 540 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 SLAMF8Q9P0V8 285 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 ERVK-18Q9QC07 812 aa10.87□□□□□ -0.67
CUX1-204ENST00000393824 POLG2Q9UHN1 485 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms