RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 EFCAB1Q9HAE3 211 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 DYRK1BQ9Y463 629 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 A8MUI8 341 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 E7EQ34 232 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 RASSF9O75901 435 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 APBB3O95704 486 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 PDYNP01213 254 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 SNRPB2P08579 225 aaKnown RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 HOXC4P09017 264 aaPredicted RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 PRR35P0CG20 571 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 ITGAXP20702 1163 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 CD6P30203 668 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 CPOXP36551 454 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 STARD6P59095 220 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 TBPL1P62380 186 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 ERVK-8P63133 956 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 HMGCS1Q01581 520 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 ZP2Q05996 745 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 GSTA3Q16772 222 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 KIAA0895LQ68EN5 471 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 OGFOD2Q6N063 350 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 DUS1LQ6P1R4 473 aaKnown RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 CYB5D1Q6P9G0 228 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 SUSD1Q6UWL2 747 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 HOMEZQ8IX15 550 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 DEFB107AQ8IZN7 70 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 L3MBTL4Q8NA19 623 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 KYQ8NBH2 561 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 OR5K2Q8NHB8 316 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 OR1E3Q8WZA6 343 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 TSACCQ96A04 125 aaPredicted RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 PPP3R2Q96LZ3 170 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 OR2M4Q96R27 311 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 OR4K3Q96R72 315 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 INSM2Q96T92 566 aaPredicted RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 NELL2Q99435 816 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 NPAS2Q99743 824 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 EBF2Q9HAK2 575 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 CCDC177Q9NQR7 707 aaPredicted RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 IMP3Q9NV31 184 aaKnown RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 WDR37Q9Y2I8 494 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 KCNE2Q9Y6J6 123 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 TRIOO75962 3097 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 KCNE1BA0A087WTH5 132 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 C9JVG2 144 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 NR5A2O00482 541 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 LSM1O15116 133 aaKnown RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 CFLARO15519 480 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 PRAMEF4O60810 478 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 KCNJ13O60928 360 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 SEC22BO75396 215 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 JUPP14923 745 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 GNAZP19086 355 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 GPX3P22352 226 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 PXNP49023 591 aaPredicted RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 RPL38P63173 70 aaKnown RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 DMPKQ09013 629 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 STX5Q13190 355 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 FZD5Q13467 585 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 DDX39BQ13838 428 aaKnown RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 DOC2AQ14183 400 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 PTK2BQ14289 1009 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 GGTA1PQ4G0N0 100 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 TPRG1LQ5T0D9 272 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 IL23RQ5VWK5 629 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 PRAMEF9Q5VWM5 478 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 LIPJQ5W064 366 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 GCNT7Q6ZNI0 430 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 Q6ZSR6 202 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 TMPRSS11BQ86T26 416 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 SCUBE1Q8IWY4 988 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 KLHDC8AQ8IYD2 350 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 RGL4Q8IZJ4 473 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 FAM160A2Q8N612 972 aaPredicted RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 FRMD1Q8N878 549 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 FAM13CQ8NE31 585 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 MAFAQ8NHW3 353 aaPredicted RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 HMGCLL1Q8TB92 370 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 USP7Q93009 1102 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 SH3KBP1Q96B97 665 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 PDXPQ96GD0 296 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 CLPTM1LQ96KA5 538 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 TBC1D17Q9HA65 648 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 LRTM1Q9HBL6 345 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 PRDM8Q9NQV8 689 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 AIG1Q9NVV5 245 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 POLR3HQ9Y535 204 aaPredicted RBP8.38□□□□□ -1.07
TDP1-203ENST00000393454 GPR45Q9Y5Y3 372 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 HS3ST3A1Q9Y663 406 aa8.38□□□□□ -1.07
TDP1-203ENST00000393454 E7ENX8 843 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 PRAMEF26H0Y7S4 382 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 PI15O43692 258 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 UGDHO60701 494 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 NDUFS2O75306 463 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 ZNF217O75362 1048 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 CIB2O75838 187 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 WFS1O76024 890 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 RASGRP1O95267 797 aa8.37□□□□□ -1.07
TDP1-203ENST00000393454 IGLV3-19P01714 112 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms