RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PRPS2P11908 318 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 ACOX1Q15067 660 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 CARD16Q5EG05 197 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 EGFLAMQ63HQ2 1017 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 ZBTB8BQ8NAP8 495 aaPredicted RBP18.37■□□□□ 0.53
CBX1-202ENST00000393408 DBF4BQ8NFT6 615 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 BARD1Q99728 777 aaKnown RBP18.37■□□□□ 0.53
CBX1-202ENST00000393408 TMEM175Q9BSA9 504 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 SLC32A1Q9H598 525 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 SELENONQ9NZV5 590 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 CASP8AP2Q9UKL3 1982 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 GABARAPO95166 117 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 ANGPTL1O95841 491 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 UGT2B4P06133 528 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 ANXA5P08758 320 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 TACR1P25103 407 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 GKP32189 559 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 BCL2L1Q07817 233 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 ZNF846Q147U1 533 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 GPR33Q49SQ1 333 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 GALNT5Q7Z7M9 940 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 TMCO5AQ8N6Q1 288 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 BEND7Q8N7W2 519 aaPredicted RBP18.36■□□□□ 0.53
CBX1-202ENST00000393408 DCAF4L2Q8NA75 395 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 HJURPQ8NCD3 748 aaPredicted RBP18.36■□□□□ 0.53
CBX1-202ENST00000393408 SELENOMQ8WWX9 145 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 TESCQ96BS2 214 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 TSSK3Q96PN8 268 aa18.36■□□□□ 0.53
CBX1-202ENST00000393408 INTS6Q9UL03 887 aaKnown RBP18.36■□□□□ 0.53
CBX1-202ENST00000393408 KCNE1BA0A087WTH5 132 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 CLDN25C9JDP6 229 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 CA12O43570 354 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 NBNO60934 754 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 ACVR2AP27037 513 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 SPAM1P38567 509 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 CAP1Q01518 475 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 CBX3Q13185 183 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 SLC14A1Q13336 389 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 PLD1Q13393 1074 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 PGS1Q32NB8 556 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 B3GNT8Q7Z7M8 397 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 SETD9Q8NE22 299 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 MCOLN3Q8TDD5 553 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 BCL7BQ9BQE9 202 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 KCTD5Q9NXV2 234 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 GPRC5BQ9NZH0 403 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 ERVK-18Q9QC07 812 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 LRFN2Q9ULH4 789 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 SAMD4AQ9UPU9 718 aaKnown RBP18.35■□□□□ 0.53
CBX1-202ENST00000393408 BRCA2P51587 3418 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.35■□□□□ 0.53
CBX1-202ENST00000393408 CCNDBP1O95273 360 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 CBSLP0DN79 551 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 SDC1P18827 310 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 PRPH2P23942 346 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 CBSP35520 551 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 RPIAP49247 311 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 OCA2Q04671 838 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 GPNMBQ14956 572 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 CDKL4Q5MAI5 379 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 CEP68Q76N32 757 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 BTLAQ7Z6A9 289 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 SAPCD2Q86UD0 394 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 FAM9CQ8IZT9 166 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 HHIPQ96QV1 700 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 ARL15Q9NXU5 204 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 ABCG2Q9UNQ0 655 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 PLXNB3Q9ULL4 1909 aa18.35■□□□□ 0.53
CBX1-202ENST00000393408 JUNDP17535 347 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 FSHRP23945 695 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 CD6P30203 668 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 CLK3P49761 638 aaKnown RBP18.34■□□□□ 0.53
CBX1-202ENST00000393408 NEK2P51955 445 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 SMAD3P84022 425 aaKnown RBP18.34■□□□□ 0.53
CBX1-202ENST00000393408 SFSWAPQ12872 951 aaKnown RBP18.34■□□□□ 0.53
CBX1-202ENST00000393408 CDH18Q13634 790 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 ZXDCQ2QGD7 858 aaPredicted RBP18.34■□□□□ 0.53
CBX1-202ENST00000393408 GGTA1PQ4G0N0 100 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 CAPN13Q6MZZ7 669 aaPredicted RBP18.34■□□□□ 0.53
CBX1-202ENST00000393408 TTC23LQ6PF05 361 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 DOK6Q6PKX4 331 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 NPAS4Q8IUM7 802 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 APCDD1Q8J025 514 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 CBARPQ8N350 705 aaPredicted RBP18.34■□□□□ 0.53
CBX1-202ENST00000393408 PAF1Q8N7H5 531 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 DUSP21Q9H596 190 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 AKIP1Q9NQ31 210 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 AGAP14A8MT82 685 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 A8MX80 341 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 GFRA2O00451 464 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 ATP6V1G1O75348 118 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 SERPINB7O75635 380 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 ZNF682O95780 498 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 FMO3P31513 532 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 DAPP51397 102 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 HNRNPFP52597 415 aaKnown RBP18.34■□□□□ 0.53
CBX1-202ENST00000393408 LAPTM4AQ15012 233 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 LAIR1Q6GTX8 287 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 OR2T5Q6IEZ7 315 aa18.34■□□□□ 0.53
CBX1-202ENST00000393408 TPGS1Q6ZTW0 290 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms