RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 FCRL6Q6DN72 434 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 LCN10Q6JVE6 187 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 TTC23LQ6PF05 361 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 PCSK4Q6UW60 755 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 SUSD1Q6UWL2 747 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 C6orf15Q6UXA7 325 aaPredicted RBP7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 CYHR1Q6ZMK1 362 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 UBE2R2Q712K3 238 aaPredicted RBP7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 STRA8Q7Z7C7 330 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 PALM2Q8IXS6 379 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 PYROXD1Q8WU10 500 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 CT55Q8WUE5 264 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 DLG3Q92796 817 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 LRRC39Q96DD0 335 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 LINGO1Q96FE5 620 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 FCRL4Q96PJ5 515 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 TWSG1Q9GZX9 223 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 SPRTNQ9H040 489 aaPredicted RBP7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 RAB17Q9H0T7 212 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 GPN2Q9H9Y4 310 aaPredicted RBP7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 FANCEQ9HB96 536 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZFATQ9P243 1243 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 CROTQ9UKG9 612 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 IKZF3Q9UKT9 509 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 ACACAQ13085 2346 aa7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 URB1O60287 2271 aaKnown RBP7.39□□□□□ -1.23
HMGB3P1-201ENST00000393368 BSNQ9UPA5 3926 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 FAM95CA0A1B0GW59 222 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 TCRBV9S1A1TA0A576 114 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 MYO1CO00159 1063 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 NKX2-8O15522 239 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 PRICKLE3O43900 615 aaPredicted RBP7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 KDM1AO60341 852 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 CPNE3O75131 537 aaKnown RBP7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 KATNA1O75449 491 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 FAM155BO75949 473 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 TSPAN12O95859 305 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 SLC16A8O95907 504 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 CATP04040 527 aaKnown RBP7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 PRB1P04280 392 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 MPC1LP0DKB6 136 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 CYP2A7P20853 494 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 FDXRP22570 491 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 MAP4P27816 1152 aaKnown RBP7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 GMPRP36959 345 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 CCNFP41002 786 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 MAGEA4P43358 317 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 GABRA4P48169 554 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 PNLIPRP1P54315 467 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 FOXL2P58012 376 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 RPS18P62269 152 aaKnown RBP7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 NFKB2Q00653 900 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 SLC9A5Q14940 896 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 CYP2A13Q16696 494 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 PHKG1Q16816 387 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 SLC5A12Q1EHB4 618 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 PTCHD3Q3KNS1 767 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 SOWAHCQ53LP3 525 aaPredicted RBP7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 C1orf189Q5VU69 101 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 C16orf46Q6P387 395 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 TMEM207Q6UWW9 146 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 KIAA0408Q6ZU52 694 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 CARFQ8N187 725 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 DTWD1Q8N5C7 304 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 ESX1Q8N693 406 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 LRRN4CLQ8ND94 238 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 OR2A1Q8NGT9 310 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 OR9A1PQ8NGU1 263 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZNF480Q8WV37 535 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 ASB11Q8WXH4 323 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 STARD8Q92502 1023 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 N4BP2L2Q92802 583 aaPredicted RBP7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 EXTL1Q92935 676 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 MR1Q95460 341 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 CLIP3Q96DZ5 547 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 UNKQ9C0B0 810 aaKnown RBP7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 SYNPO2LQ9H987 977 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 CAB39LQ9H9S4 337 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 SLC6A20Q9NP91 592 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 LHX9Q9NQ69 397 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 STARD5Q9NSY2 213 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 IRAK4Q9NWZ3 460 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 TAS2R13Q9NYV9 303 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 MOCS1Q9NZB8 636 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 SPATA7Q9P0W8 599 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 TAC3Q9UHF0 121 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 DMGDHQ9UI17 866 aaKnown RBP7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 COMMD10Q9Y6G5 202 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 IGSF10Q6WRI0 2623 aa7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 SPENQ96T58 3664 aaKnown RBP7.38□□□□□ -1.23
HMGB3P1-201ENST00000393368 NPEPPSL1A6NEC2 478 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 E7EQ34 232 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 H3BMH7 237 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 GFYI3L273 518 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 TERTO14746 1132 aaKnown RBP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 NDC80O14777 642 aa7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 EIF3HO15372 352 aaKnown RBP eCLIP7.37□□□□□ -1.23
HMGB3P1-201ENST00000393368 MAP3K7O43318 606 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms