RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 OPN1SWP03999 348 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 APODP05090 189 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 FPR1P21462 350 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 C1QTNF8P60827 252 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 GALNT2Q10471 571 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 NOGQ13253 232 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 OLIG2Q13516 323 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 ZNF829Q3KNS6 432 aaPredicted RBP12.84□□□□□ -0.35
LCA5-202ENST00000392959 FBXO43Q4G163 708 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 ZNF613Q6PF04 617 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 SMG7Q92540 1137 aaKnown RBP12.84□□□□□ -0.35
LCA5-202ENST00000392959 HSPBAP1Q96EW2 488 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 ZNF514Q96K75 400 aaPredicted RBP12.84□□□□□ -0.35
LCA5-202ENST00000392959 TMEM74Q96NL1 305 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 KCNC2Q96PR1 638 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 POFUT2Q9Y2G5 429 aa12.84□□□□□ -0.35
LCA5-202ENST00000392959 J3KR12 359 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 MID1O15344 667 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 TLL1O43897 1013 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 INMTO95050 263 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 PCCBP05166 539 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 FAM163BP0C2L3 166 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 SLC15A1P46059 708 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 ARHGDIBP52566 201 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 ABHD18Q0P651 414 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 MOGQ16653 247 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 TPRG1LQ5T0D9 272 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 OR14C36Q8NHC7 312 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 EFHD2Q96C19 240 aaPredicted RBP12.83□□□□□ -0.35
LCA5-202ENST00000392959 LMLNQ96KR4 655 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 PREBQ9HCU5 417 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 ZDHHC3Q9NYG2 299 aa12.83□□□□□ -0.35
LCA5-202ENST00000392959 ILVBLA1L0T0 632 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 TTC24A2A3L6 582 aaPredicted RBP12.83□□□□□ -0.36
LCA5-202ENST00000392959 FAM189A1O60320 539 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 RFPL1O75677 317 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 HMGN1P05114 100 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 CD2P06729 351 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 CBX5P45973 191 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 ADGRF1Q5T601 910 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 DNAJB7Q7Z6W7 309 aaPredicted RBP12.83□□□□□ -0.36
LCA5-202ENST00000392959 STX12Q86Y82 276 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 ZC3H3Q8IXZ2 948 aaKnown RBP12.83□□□□□ -0.36
LCA5-202ENST00000392959 ITPAQ9BY32 194 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 ITM2CQ9NQX7 267 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 RIMKLBQ9ULI2 386 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 PIK3CBP42338 1070 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 DNASE1L1P49184 302 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 NUDT6P53370 316 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 CAP1Q01518 475 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 ILF3Q12906 894 aaKnown RBP eCLIP12.83□□□□□ -0.36
LCA5-202ENST00000392959 PRSS55Q6UWB4 352 aaPredicted RBP12.83□□□□□ -0.36
LCA5-202ENST00000392959 OR4F6Q8NGB9 312 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 ZCCHC10Q8TBK6 192 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 ZFAND2BQ8WV99 257 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 SEC14L1Q92503 715 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 MNTQ99583 582 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 SLC35A5Q9BS91 424 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 FBRSL1Q9HCM7 1045 aaKnown RBP12.83□□□□□ -0.36
LCA5-202ENST00000392959 LCHNA4D1U4 455 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 SAP18O00422 153 aaKnown RBP12.83□□□□□ -0.36
LCA5-202ENST00000392959 HMGB3O15347 200 aaKnown RBP12.83□□□□□ -0.36
LCA5-202ENST00000392959 HTRA2O43464 458 aaPredicted RBP12.83□□□□□ -0.36
LCA5-202ENST00000392959 FGF3P11487 239 aaPredicted RBP12.83□□□□□ -0.36
LCA5-202ENST00000392959 AKT2P31751 481 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 SLBPQ14493 270 aaKnown RBP eCLIP12.83□□□□□ -0.36
LCA5-202ENST00000392959 LRRC73Q5JTD7 316 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.83□□□□□ -0.36
LCA5-202ENST00000392959 TRIM74Q86UV6 250 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 TRIM73Q86UV7 250 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 COX18Q8N8Q8 333 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 GEMIN6Q8WXD5 167 aaKnown RBP12.83□□□□□ -0.36
LCA5-202ENST00000392959 ZSWIM3Q96MP5 696 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 DEFB118Q96PH6 123 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 NPY6RQ99463 290 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 SLC29A3Q9BZD2 475 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 TCF7L1Q9HCS4 588 aa12.83□□□□□ -0.36
LCA5-202ENST00000392959 OR14I1A6ND48 311 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 ANXA2P2A6NMY6 339 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 ANXA2P07355 339 aaKnown RBP12.82□□□□□ -0.36
LCA5-202ENST00000392959 G6PDP11413 515 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 TUBA1BP68363 451 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 ZNF33AQ06730 810 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 CBLBQ13191 982 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 MOGSQ13724 837 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 MBOAT1Q6ZNC8 495 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 TUBA1AQ71U36 451 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 LYSMD3Q7Z3D4 306 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 TMEM126BQ8IUX1 230 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 C1orf52Q8N6N3 182 aaKnown RBP12.82□□□□□ -0.36
LCA5-202ENST00000392959 KLHL6Q8WZ60 621 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 KIAA1191Q96A73 305 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 SUV39H2Q9H5I1 410 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 RPF2Q9H7B2 306 aaKnown RBP12.82□□□□□ -0.36
LCA5-202ENST00000392959 THUMPD1Q9NXG2 353 aaKnown RBP12.82□□□□□ -0.36
LCA5-202ENST00000392959 ATRNL1Q5VV63 1379 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 M0QX08 132 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 FANCGO15287 622 aa12.82□□□□□ -0.36
LCA5-202ENST00000392959 CREG1O75629 220 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms