RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 ATP6AP2O75787 350 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 SERPINI2O75830 405 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 SOX30O94993 753 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 TRIM16O95361 564 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 DIRAS3O95661 229 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 CXCL14O95715 111 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 LATS1O95835 1130 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 LDLRP01130 860 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 C9P02748 559 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 LIPFP07098 398 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 FGF2P09038 288 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 SP9P0CG40 484 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 IRF2P14316 349 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 EZRP15311 586 aaKnown RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 AREGP15514 252 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 CKMT2P17540 419 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 POLR2CP19387 275 aaPredicted RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 NR1D1P20393 614 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 SCP2P22307 547 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 CBLP22681 906 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 CERS1P27544 350 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 GNL1P36915 607 aaPredicted RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 MNDAP41218 407 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 TMPOP42166 694 aaKnown RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 NKX2-1P43699 371 aaPredicted RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 OR3A1P47881 315 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 IFNAR2P48551 515 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 RASSF2P50749 326 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 HNRNPFP52597 415 aaKnown RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 SLC26A5P58743 744 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 KCNJ10P78508 379 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 HMGN5P82970 282 aaKnown RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 MAT1AQ00266 395 aaKnown RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 PRKCEQ02156 737 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 RUNX1T1Q06455 604 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 RASGEF1BQ0VAM2 473 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 ILF2Q12905 390 aaKnown RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 PPP1R8Q12972 351 aaKnown RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 LCP2Q13094 533 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 GPS2Q13227 327 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 NPTX1Q15818 432 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 INAQ16352 499 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 ACKR1Q16570 336 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 CA9Q16790 459 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 MAJINQ3KP22 176 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 KRTAP19-4Q3LI73 84 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 SPATS1Q496A3 300 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 TMEM35AQ53FP2 167 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 RAB6CQ53S08 254 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 LDLRAP1Q5SW96 308 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 NDUFAF5Q5TEU4 345 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 SUSD4Q5VX71 490 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 PM20D1Q6GTS8 502 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 OR7E24Q6IFN5 339 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 FAM166AQ6J272 317 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 ABRAXAS1Q6UWZ7 409 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 CCNI2Q6ZMN8 369 aaPredicted RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 MEX3BQ6ZN04 569 aaKnown RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 RBM43Q6ZSC3 357 aaKnown RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 ASPGQ86U10 573 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 FJX1Q86VR8 437 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 ANKRD46Q86W74 232 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 MEX3DQ86XN8 651 aaKnown RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 PTOV1Q86YD1 416 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 TMEM126BQ8IUX1 230 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 MMD2Q8IY49 270 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 C1orf87Q8N0U7 546 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 LGI2Q8N0V4 545 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 CRYBG2Q8N1P7 616 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 PGBD5Q8N414 524 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 RYBPQ8N488 228 aaPredicted RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 BMPERQ8N8U9 685 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 AMER3Q8N944 861 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 LMNTD1Q8N9Z9 388 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 L3MBTL4Q8NA19 623 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 CCDC63Q8NA47 563 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 NEXN-AS1Q8NBZ9 246 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 NPEPL1Q8NDH3 523 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 ZNF548Q8NEK5 533 aaPredicted RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 TMEM185AQ8NFB2 350 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 OR11H4Q8NGC9 324 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 OR4K1Q8NGD4 311 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 OR13J1Q8NGT2 312 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 OR14A16Q8NHC5 309 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 THAP6Q8TBB0 222 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 SLC20A1Q8WUM9 679 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 TMEM255BQ8WV15 326 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 CKAP2Q8WWK9 683 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 PIGBQ92521 554 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 N4BP2L2Q92802 583 aaPredicted RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 WBP2Q969T9 261 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 RFT1Q96AA3 541 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 PHF21AQ96BD5 680 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 DHX58Q96C10 678 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 TRIM44Q96DX7 344 aaPredicted RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 MTBPQ96DY7 904 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 BICD1Q96G01 975 aa1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 RBM18Q96H35 190 aaKnown RBP1.8□□□□□ -2.12
SNORA48.1-201ENST00000390879 URB1-AS1Q96HZ7 61 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms