RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 FKBP10Q96AY3 582 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 BIRC8Q96P09 236 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 WDR54Q9H977 334 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 UTP6Q9NYH9 597 aaKnown RBP13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 SAMD15Q9P1V8 674 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 MARCH4Q9P2E8 410 aaPredicted RBP13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 PLAGL1Q9UM63 463 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 PPP2R2CQ9Y2T4 447 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 PTRH2Q9Y3E5 179 aaKnown RBP13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 SNRNP200O75643 2136 aaKnown RBP13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 FAM237BA0A1B0GVD1 139 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 A0A1B0GX78 115 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 ZNF839A8K0R7 811 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 PHF2O75151 1096 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 KRT14P02533 472 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 PDGFAP04085 211 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 ALPPP05187 535 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 FMO4P31512 558 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 CRADDP78560 199 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 ARHGAP19Q14CB8 494 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 TTLL9Q3SXZ7 439 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 ANKRD20A4Q4UJ75 823 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 CPZQ66K79 652 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 NEPROQ6NW34 567 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 MICALCLQ6ZW33 695 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 NEK10Q6ZWH5 1172 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 FAM26EQ8N5C1 309 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 PRELID2Q8N945 189 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 GALNT11Q8NCW6 608 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 GABPB2Q8TAK5 448 aaPredicted RBP13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 LKAAEAR1Q8TD35 194 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 CALML6Q8TD86 181 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 TM9SF4Q92544 642 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 MAGOHBQ96A72 148 aaKnown RBP13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 SLC26A1Q9H2B4 701 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 XAB2Q9HCS7 855 aaKnown RBP13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 ATP13A2Q9NQ11 1180 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 FAM114A2Q9NRY5 505 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 SYBUQ9NX95 663 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 ANKMY1Q9P2S6 941 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 DHCR7Q9UBM7 475 aaKnown RBP13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 NXT1Q9UKK6 140 aaKnown RBP13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 COMMD10Q9Y6G5 202 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 BSNQ9UPA5 3926 aa13.06□□□□□ -0.32
TRBV4-1-201ENST00000390357 ASH1LQ9NR48 2969 aaKnown RBP13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 TNRC6AQ8NDV7 1962 aaKnown RBP13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 FITM1A5D6W6 292 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 CLEC18AA5D8T8 446 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 E5RI56 91 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 DSCR3O14972 297 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 HCRTR1O43613 425 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 PKMP14618 531 aaKnown RBP13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 OTX2P32243 289 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 CXCR5P32302 372 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 GRIA3P42263 894 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 GCGRP47871 477 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 EMP3P54852 163 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 MLLT10P55197 1068 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 CCZ1BP86790 482 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 CCZ1P86791 482 aaPredicted RBP13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 RELAQ04206 551 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 GPS1Q13098 491 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 THOC5Q13769 683 aaKnown RBP13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 GBX1Q14549 363 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 KCNJ11Q14654 390 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 CYP2A13Q16696 494 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 DEFB110Q30KQ9 67 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 DCAF10Q5QP82 559 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 VWA5B1Q5TIE3 1220 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 C1orf189Q5VU69 101 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 FCRL6Q6DN72 434 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 PRMT9Q6P2P2 845 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 CASC4Q6P4E1 433 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 IGFL3Q6UXB1 125 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 CLEC18BQ6UXF7 455 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 CILP2Q8IUL8 1156 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 CLEC18CQ8NCF0 446 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 OR9A1PQ8NGU1 263 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 CPT1CQ8TCG5 803 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 GRK7Q8WTQ7 553 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 LPGAT1Q92604 370 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 PNPLA2Q96AD5 504 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 ZNF285Q96NJ3 590 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 SELENOSQ9BQE4 189 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 SLAMF7Q9NQ25 335 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 MAP4K5Q9Y4K4 846 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 FAM169AQ9Y6X4 670 aa13.05□□□□□ -0.32
TRBV4-1-201ENST00000390357 AGPSO00116 658 aa13.04□□□□□ -0.32
TRBV4-1-201ENST00000390357 TXNDC9O14530 226 aa13.04□□□□□ -0.32
TRBV4-1-201ENST00000390357 CATP04040 527 aaKnown RBP13.04□□□□□ -0.32
TRBV4-1-201ENST00000390357 MMP11P24347 488 aa13.04□□□□□ -0.32
TRBV4-1-201ENST00000390357 ARNTP27540 789 aa13.04□□□□□ -0.32
TRBV4-1-201ENST00000390357 CMPK1P30085 196 aa13.04□□□□□ -0.32
TRBV4-1-201ENST00000390357 CHAF1BQ13112 559 aa13.04□□□□□ -0.32
TRBV4-1-201ENST00000390357 AIMP2Q13155 320 aaKnown RBP13.04□□□□□ -0.32
TRBV4-1-201ENST00000390357 ATP1A4Q13733 1029 aa13.04□□□□□ -0.32
TRBV4-1-201ENST00000390357 DHX34Q14147 1143 aaKnown RBP13.04□□□□□ -0.32
TRBV4-1-201ENST00000390357 MYBPC3Q14896 1274 aa13.04□□□□□ -0.32
TRBV4-1-201ENST00000390357 CYP1B1Q16678 543 aa13.04□□□□□ -0.32
TRBV4-1-201ENST00000390357 CTSL3PQ5NE16 218 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms