RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 G3V2L1 256 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 H0YAE9 185 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 EIF3FO00303 357 aaPredicted RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 PDHXO00330 501 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 PPM1GO15355 546 aaPredicted RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 MAGEB4O15481 346 aaPredicted RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 OGG1O15527 345 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TGFB1I1O43294 461 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 XRCC3O43542 346 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 LATO43561 262 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 HCRTR2O43614 444 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 SSX4O60224 188 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 PRDM1O75626 825 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 CEACAM4O75871 244 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 RSL1D1O76021 490 aaKnown RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 SEC14L2O76054 403 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 F9P00740 461 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 POLBP06746 335 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 QDPRP09417 244 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 SUPT20HL2P0C7V6 817 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 RSPH10BP0C881 870 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 HSPA8P11142 646 aaKnown RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 UMPSP11172 480 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 UBL4AP11441 157 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 VDRP11473 427 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 ANPEPP15144 967 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TNFAIP3P21580 790 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 JAK1P23458 1154 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 ABCD3P28288 659 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 SLC6A6P31641 620 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 CSTF2P33240 577 aaKnown RBP eCLIP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 PBX3P40426 434 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 ARL1P40616 181 aaPredicted RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 MNDAP41218 407 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 RGRP47804 291 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TRAPPC10P48553 1259 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 ZNF133P52736 654 aaPredicted RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 NDUFV3P56181 108 aaKnown RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 ABCE1P61221 599 aaKnown RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 RPL7AP62424 266 aaKnown RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 IRX4P78413 519 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 FKBP3Q00688 224 aaKnown RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TAF10Q12962 218 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TRPC3Q13507 836 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 KRT33BQ14525 404 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 MELKQ14680 651 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TMEM132DQ14C87 1099 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 BRD3Q15059 726 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 DLG2Q15700 870 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TAB1Q15750 504 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TAF12Q16514 161 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 ODF4Q2M2E3 257 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 PRICKLE4Q2TBC4 344 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 PDLIM3Q53GG5 364 aaPredicted RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 SOWAHCQ53LP3 525 aaPredicted RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 SPECC1Q5M775 1068 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 CELF3Q5SZQ8 465 aaKnown RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 FAM182AQ5T1J6 154 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 SLC9C2Q5TAH2 1124 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 GARNL3Q5VVW2 1013 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 ACSM2BQ68CK6 577 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 LEMD1Q68G75 181 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 CCSAPQ6IQ19 270 aaPredicted RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 UGT3A1Q6NUS8 523 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 CYP20A1Q6UW02 462 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 LINGO4Q6UY18 593 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TMUB2Q71RG4 321 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 RPAP2Q8IXW5 612 aaPredicted RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 SPICE1Q8N0Z3 855 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TRIML1Q8N9V2 468 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 SPATA5Q8NB90 893 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 SLC37A3Q8NCC5 494 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TMEM116Q8NCL8 245 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 CSNK1G2-AS1Q8NCQ2 148 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 OR7A2PQ8NGA2 310 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 OR11H4Q8NGC9 324 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 OR5T2Q8NGG2 359 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 OR4Q3Q8NH05 313 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TDRD7Q8NHU6 1098 aaKnown RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 NFKBIDQ8NI38 313 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 KIAA1524Q8TCG1 905 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TRPC4APQ8TEL6 797 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 U2AF1L4Q8WU68 220 aaKnown RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 FAM149B1Q96BN6 582 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 MOAP1Q96BY2 351 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 ERLEC1Q96DZ1 483 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 ZNF799Q96GE5 643 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 C2orf48Q96LS8 159 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 FAM218AQ96MZ4 157 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 OR6C1Q96RD1 312 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 MPHOSPH6Q99547 160 aaKnown RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 RAD9AQ99638 391 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 LPAR4Q99677 370 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 MAPKAP1Q9BPZ7 522 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 OVOL2Q9BRP0 275 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 C16orf70Q9BSU1 422 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 CCDC28BQ9BUN5 200 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 KIFC3Q9BVG8 833 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 FNDC11Q9BVV2 318 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 RBM24Q9BX46 236 aaKnown RBP0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms