RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TRIM23P36406 574 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 NFYCQ13952 458 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 DOC2AQ14183 400 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 CACHD1Q5VU97 1274 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 PRMT9Q6P2P2 845 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 RALGPS2Q86X27 583 aaPredicted RBP19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 SLC15A3Q8IY34 581 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 LIX1Q8N485 282 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 TP53I13Q8NBR0 393 aaPredicted RBP19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 C1QTNF2Q9BXJ5 285 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 OSBPL6Q9BZF3 934 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 ZDHHC5Q9C0B5 715 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 OR52A5Q9H2C5 316 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 TTYH1Q9H313 450 aaPredicted RBP19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 TM7SF3Q9NS93 570 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 ABCD2Q9UBJ2 740 aa19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 DYTNA2CJ06 578 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 C2CD4DB7Z1M9 353 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 H3BNX3 289 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 NME4O00746 187 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 SLC6A2P23975 617 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 CASP2P42575 452 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 SGCGQ13326 291 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 SUSD1Q6UWL2 747 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 OR9A1PQ8NGU1 263 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 FAM131CQ96AQ9 280 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 NMRK1Q9NWW6 199 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 ASIC5Q9NY37 505 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 SLAMF8Q9P0V8 285 aa19.26■□□□□ 0.67
PDLIM5-205ENST00000380180 MRPS22P82650 360 aaKnown RBP19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 SYTL1Q8IYJ3 562 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 RNF175Q8N4F7 328 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 DNAJB14Q8TBM8 379 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 WDR26Q9H7D7 661 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 TRPV5Q9NQA5 729 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 A0A1W2PQU0 124 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 SERTM1A2A2V5 107 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 NVLO15381 856 aaKnown RBP19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 BCKDHAP12694 445 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 PRPH2P23942 346 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 VARSP26640 1264 aaKnown RBP19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 DGKQP52824 942 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 FOXM1Q08050 763 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 PCDH1Q08174 1060 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 GRSF1Q12849 480 aaKnown RBP eCLIP19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 TRAP1Q12931 704 aaKnown RBP19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 MAP7D1Q3KQU3 841 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 USP39Q53GS9 565 aaKnown RBP19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 IER5LQ5T953 404 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 SLC2A7Q6PXP3 512 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 DHDDSQ86SQ9 333 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 SLC44A3Q8N4M1 653 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 SLC17A9Q9BYT1 436 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 TRIM8Q9BZR9 551 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 FBRSQ9HAH7 460 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 KCNK12Q9HB15 430 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 CMTM6Q9NX76 183 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 GMPR2Q9P2T1 348 aaKnown RBP19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 LIMD1Q9UGP4 676 aa19.25■□□□□ 0.67
PDLIM5-205ENST00000380180 GRXCR2A6NFK2 248 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 RNGTTO60942 597 aaKnown RBP19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 DRD1P21728 446 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 TEAD1P28347 426 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 ADPRHP54922 357 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 TBPL1P62380 186 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 RPA4Q13156 261 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 TMEM259Q4ZIN3 620 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 SWT1Q5T5J6 900 aaKnown RBP19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 CAPN13Q6MZZ7 669 aaPredicted RBP19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 KIAA1161Q6NSJ0 714 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 CHRDL2Q6WN34 429 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 PDZD3Q86UT5 571 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 LMNTD1Q8N9Z9 388 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 PHC3Q8NDX5 983 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 WDR20Q8TBZ3 569 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 CMTM7Q96FZ5 175 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 DPY30Q9C005 99 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 PSMD13Q9UNM6 376 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 ASF1AQ9Y294 204 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 PCDHA9Q9Y5H5 950 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 KCNE2Q9Y6J6 123 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 DNMT3AQ9Y6K1 912 aaPredicted RBP19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 TBC1D3DA0A087WVF3 549 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 TBC1D3IA0A087WXS9 549 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 TBC1D3EA0A087X179 549 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 TBC1D3KA0A087X1G2 549 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 TBC1D3FA6NER0 549 aaPredicted RBP19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 TBC1D3LB9A6J9 549 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 IFRD1O00458 451 aaPredicted RBP19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 TBC1D3HP0C7X1 549 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 HNF4AP41235 474 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 MUM1Q2TAK8 710 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 C6orf10Q5SRN2 563 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 METRNLQ641Q3 311 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 ICE2Q659A1 982 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 TBC1D3GQ6DHY5 549 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 TBC1D3CQ6IPX1 549 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 GRHL2Q6ISB3 625 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 UNC5DQ6UXZ4 953 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 SPATA24Q86W54 205 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms