RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SLC5A10A0PJK1 596 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 TMEM221A6NGB7 291 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 M0R296 226 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 AKAP10O43572 662 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 GMNNO75496 209 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 PDYNP01213 254 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 C7P10643 843 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 HSD3B1P14060 373 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 HOXB6P17509 224 aaKnown RBP10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 FASP25445 335 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 HSD3B2P26439 372 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 HNF4AP41235 474 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 PNLIPRP1P54315 467 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 CLDN8P56748 225 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 RPS14P62263 151 aaKnown RBP10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 PLOD1Q02809 727 aaPredicted RBP10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 CREB5Q02930 508 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 TMEM115Q12893 351 aaPredicted RBP10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 ELAVL3Q14576 367 aaKnown RBP10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 CPSF6Q16630 551 aaKnown RBP eCLIP10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 DUSP6Q16828 381 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 FNDC3BQ53EP0 1204 aaKnown RBP10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 RABL3Q5HYI8 236 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 UGT2A3Q6UWM9 527 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 FKBP9P1Q75LS8 142 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 DSG4Q86SJ6 1040 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 C12orf40Q86WS4 652 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 SPPL2CQ8IUH8 684 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 NPAS3Q8IXF0 933 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 TBC1D21Q8IYX1 336 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 SLC22A15Q8IZD6 547 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 ADGRG5Q8IZF4 528 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 RASGEF1AQ8N9B8 481 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 TRPV3Q8NET8 790 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 CSGALNACT1Q8TDX6 532 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 PPWD1Q96BP3 646 aaKnown RBP10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 RSPRY1Q96DX4 576 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 ZNF514Q96K75 400 aaPredicted RBP10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 CCDC115Q96NT0 180 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 LRRC3BQ96PB8 259 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 HBEGFQ99075 208 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 P2RY13Q9BPV8 354 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 ACPTQ9BZG2 426 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 RMND5AQ9H871 391 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 INTS7Q9NVH2 962 aaKnown RBP10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 GDE1Q9NZC3 331 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 EGFL7Q9UHF1 273 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 ANAPC2Q9UJX6 822 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 MAPRE3Q9UPY8 281 aa10.19□□□□□ -0.78
POLR2J3-201ENST00000379340 EIF4E1BA6NMX2 242 aaKnown RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 TSPAN6O43657 245 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 PRMT3O60678 531 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 MTX2O75431 263 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 ERN1O75460 977 aaKnown RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 TNFAIP8O95379 198 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 PGRP06401 933 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 LINGO3P0C6S8 592 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 BCKDHAP12694 445 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 FSHRP23945 695 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 PFN3P60673 137 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 HMGCS1Q01581 520 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 DPTQ07507 201 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 GTF2H3Q13889 308 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 MAPKAPK3Q16644 382 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 DPY19L1Q2PZI1 675 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 TMEM52BQ4KMG9 183 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 FAM78AQ5JUQ0 283 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 FRG2Q64ET8 278 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 HMBOX1Q6NT76 420 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 PPP4R4Q6NUP7 873 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 NEK5Q6P3R8 708 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 FBXL19Q6PCT2 694 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 BMP8AQ7Z5Y6 402 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 GTF2H4Q92759 462 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 TESCQ96BS2 214 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 NUS1Q96E22 293 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 CENPNQ96H22 339 aaPredicted RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 FCRL1Q96LA6 429 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 NSMCE2Q96MF7 247 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 GBP5Q96PP8 586 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 FRG2BQ96QU4 278 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 CDCA3Q99618 268 aaPredicted RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 CENPKQ9BS16 269 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 C9orf16Q9BUW7 83 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 MTG2Q9H4K7 406 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 DYRK4Q9NR20 520 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 AGPAT4Q9NRZ5 378 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 FARSBQ9NSD9 589 aaKnown RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 GPRC5BQ9NZH0 403 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 MBD1Q9UIS9 605 aaPredicted RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 MAN2B2Q9Y2E5 1009 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 ZFC3H1O60293 1989 aaKnown RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 OR2AG2A6NM03 316 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 ARHGEF33A8MVX0 844 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 PRRT4C9JH25 899 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 C1QTNF3-AMACRE9PGA6 284 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 CLGNO14967 610 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 AREL1O15033 823 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 INPP4BO15327 924 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 TIPRLO75663 272 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms