RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 LMLNQ96KR4 655 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 APOL4Q9BPW4 351 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 NOL6Q9H6R4 1146 aaKnown RBP13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 RAPGEFL1Q9UHV5 662 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 CNOT6Q9ULM6 557 aaKnown RBP13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 DUSP12Q9UNI6 340 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 ZNF232Q9UNY5 417 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 SH3GLB1Q9Y371 365 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 MAP4K5Q9Y4K4 846 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 MANBAO00462 879 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 SRPRAP08240 638 aaKnown RBP13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 KCNA5P22460 613 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 ADRA1AP35348 466 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 KRT20P35900 424 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 HEPACAMQ14CZ8 416 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 PTPRRQ15256 657 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 DGKKQ5KSL6 1271 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 C6orf136Q5SQH8 315 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 OR52B6Q8NGF0 335 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 SPACA7Q96KW9 195 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 NR1H4Q96RI1 486 aaPredicted RBP13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 ZNF382Q96SR6 550 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 DGCR6LQ9BY27 220 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 ARMC7Q9H6L4 198 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 RMI1Q9H9A7 625 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 PTGDR2Q9Y5Y4 395 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 IGLV3-10A0A075B6K4 115 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 TRIM24O15164 1050 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 LRRC32Q14392 662 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 HLA-DQA1Q5Y7H0 255 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 DENND5AQ6IQ26 1287 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 ADGRG2Q8IZP9 1017 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 TERB1Q8NA31 727 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 TMEM145Q8NBT3 493 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 SETD9Q8NE22 299 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 REXO5Q96IC2 774 aaKnown RBP13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 DUSP26Q9BV47 211 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 NDEL1Q9GZM8 345 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 EQTNQ9NQ60 294 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 RPS6KB2Q9UBS0 482 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 CDH7Q9ULB5 785 aa13.83□□□□□ -0.19
SHROOM1-203ENST00000378679 TRIM43BA6NCK2 446 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 KIAA0355O15063 1070 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 PRPS1L1P21108 318 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 CDH3P22223 829 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 VARSP26640 1264 aaKnown RBP13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 IRS1P35568 1242 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 C21orf59P57076 290 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 GPR107Q5VW38 600 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 FAM129CQ86XR2 697 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 GPR26Q8NDV2 337 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 PHF10Q8WUB8 498 aaKnown RBP13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 SMPDL3AQ92484 453 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 FUBP1Q96AE4 644 aaKnown RBP13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 TRIM43Q96BQ3 446 aaPredicted RBP13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 PTERQ96BW5 349 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC29A3Q9BZD2 475 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 RERGLQ9H628 205 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 DAPK2Q9UIK4 370 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 FBXW2Q9UKT8 454 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 LINC01553A4QN01 128 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC28A2O43868 658 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 C6P13671 934 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 MYOGP15173 224 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 ZNF8P17098 575 aaPredicted RBP13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 MAGP20916 626 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 C1QTNF8P60827 252 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 SYVN1Q86TM6 617 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 OFCC1Q8IZS5 231 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 C8orf59Q8N0T1 100 aaPredicted RBP13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC43A3Q8NBI5 491 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 C11orf65Q8NCR3 313 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 HM13Q8TCT9 377 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 MAPK15Q8TD08 544 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 BTN2A2Q8WVV5 523 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 RAB7BQ96AH8 199 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 ZIM2Q9NZV7 527 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 TEKT2Q9UIF3 430 aa13.83□□□□□ -0.2
SHROOM1-203ENST00000378679 IGLON5A6NGN9 336 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 MAGEB17A8MXT2 336 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 KMOO15229 486 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 DNAJA2O60884 412 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 PRAMEF12O95522 483 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 KLF8O95600 359 aaPredicted RBP13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 GABRB3P28472 473 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 SERPINB10P48595 397 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 HKDC1Q2TB90 917 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 CDK20Q8IZL9 346 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 ZCCHC10Q8TBK6 192 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 LRTOMTQ8WZ04 291 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 DGCR14Q96DF8 476 aaKnown RBP13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 LRRC3Q9BY71 257 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 MCOLN1Q9GZU1 580 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 IGSF5Q9NSI5 407 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 SAMD4AQ9UPU9 718 aaKnown RBP13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 A0A1W2PP18 115 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 SERPINB7O75635 380 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 IGLV3-25P01717 112 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC35G6P0C7Q6 338 aa13.82□□□□□ -0.2
SHROOM1-203ENST00000378679 HSMCR30P0CW71 290 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms