RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ARL5AQ9Y689 179 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 LOC100130705A0A1B0GUX0 176 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 OR51F1A6NGY5 319 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 NIPSNAP2O75323 286 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 PENKP01210 267 aaPredicted RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 ZNF24P17028 368 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 KELP23276 732 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 AZGP1P25311 298 aaKnown RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 LBX1P52954 281 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 E2F2Q14209 437 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 DSC3Q14574 896 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 RBM20Q5T481 1227 aaKnown RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 FAM91A1Q658Y4 838 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 RTL4Q6ZR62 310 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 CYP2U1Q7Z449 544 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 CILP2Q8IUL8 1156 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 SAMD14Q8IZD0 417 aaPredicted RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 OR9I1Q8NGQ6 314 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 HDAC2Q92769 488 aaKnown RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 GTPBP3Q969Y2 492 aaKnown RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 FERD3LQ96RJ6 166 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 EFCAB11Q9BUY7 163 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 PCBD2Q9H0N5 130 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 PIGUQ9H490 435 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 PAK6Q9NQU5 681 aaPredicted RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 PHPT1Q9NRX4 125 aaPredicted RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 MCUBQ9NWR8 336 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 VPS29Q9UBQ0 182 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 OAS3Q9Y6K5 1087 aaKnown RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 WDR81Q562E7 1941 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 FAM92AA1XBS5 289 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 PRORSD1PA6NEY8 169 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 NT5C1B-RDH14C9J2C7 533 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 SDHDO14521 159 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 HMGB3O15347 200 aaKnown RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 KLHL18O94889 574 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 PRNPP04156 253 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 CD247P20963 164 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 CCND3P30281 292 aaPredicted RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 ARSFP54793 590 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 PRR5P85299 388 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 NFKB2Q00653 900 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 SERINC3Q13530 473 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 SUZ12Q15022 739 aaKnown RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 ZNF311Q5JNZ3 666 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 STEAP4Q687X5 459 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 NIPAL1Q6NVV3 410 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 MAMDC4Q6UXC1 1216 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 LRRC70Q7Z2Q7 622 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 TMEM135Q86UB9 458 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 ZNF248Q8NDW4 579 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 ZBED6CLQ96FA7 236 aaPredicted RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 PIWIL1Q96J94 861 aaKnown RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 ZNF514Q96K75 400 aaPredicted RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 MIPEPQ99797 713 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 PDCD10Q9BUL8 212 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 TLE6Q9H808 572 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 CCM2LQ9NUG4 571 aaPredicted RBP8.21□□□□□ -1.1
VPS36-201ENST00000378060 DHRS7Q9Y394 339 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 PDE4DIPQ5VU43 2346 aa8.21□□□□□ -1.1
VPS36-201ENST00000378060 A0A1W2PPW3 197 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 H3BNH8 94 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 FKTNO75072 461 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 ADH1CP00326 375 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 MYCLP1P12525 358 aaPredicted RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 PRKAR2AP13861 404 aaKnown RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 FMO3P31513 532 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 MNDAP41218 407 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 STC1P52823 247 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 LSAMPQ13449 338 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 ALG11Q2TAA5 492 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 PDE12Q6L8Q7 609 aaKnown RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 FBXL22Q6P050 247 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 HACD2Q6Y1H2 254 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 RNF44Q7L0R7 432 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 PLD6Q8N2A8 252 aaKnown RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 LINC00471Q8N535 108 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 UFD1Q92890 307 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 CNPPD1Q9BV87 410 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 ITPAQ9BY32 194 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 SLC22A4Q9H015 551 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 ZNF236Q9UL36 1845 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 PITPNM1O00562 1244 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 ACOX3O15254 700 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 CREG1O75629 220 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 GNRH1P01148 92 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 SLC6A4P31645 630 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 CLCN4P51793 760 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 OR2B6P58173 313 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 ABATP80404 500 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 CARTPTQ16568 116 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 SYT16Q17RD7 645 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 ATP13A5Q4VNC0 1218 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 CRTC2Q53ET0 693 aaPredicted RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 ZNF678Q5SXM1 525 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 CIR1Q86X95 450 aaPredicted RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 OXR1Q8N573 874 aa8.2□□□□□ -1.1
VPS36-201ENST00000378060 ZBTB8BQ8NAP8 495 aaPredicted RBP8.2□□□□□ -1.1
VPS36-201ENST00000378060 PYURFQ96I23 114 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms