RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 A0A1W2PQ67 120 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.63□□□□□ -0.23
MSH5-202ENST00000375740 MANBAO00462 879 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 NPPAP01160 153 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 BMP2P12643 396 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 ATP1B2P14415 290 aaPredicted RBP13.63□□□□□ -0.23
MSH5-202ENST00000375740 POLR2EP19388 210 aaKnown RBP13.63□□□□□ -0.23
MSH5-202ENST00000375740 IL10P22301 178 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 WEE1P30291 646 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 AKT1P31749 480 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 DMC1Q14565 340 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 ZNF77Q15935 545 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 ARSIQ5FYB1 569 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 METTL2BQ6P1Q9 378 aaKnown RBP13.63□□□□□ -0.23
MSH5-202ENST00000375740 DLEU7Q6UYE1 221 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 HSD11B1LQ7Z5J1 315 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 NECAB2Q7Z6G3 386 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 HID1Q8IV36 788 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 VRK3Q8IV63 474 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 DPP10Q8N608 796 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 ANKFN1Q8N957 763 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 SPPL3Q8TCT6 385 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 MTG2Q9H4K7 406 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 PKD2L2Q9NZM6 624 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 DYTNA2CJ06 578 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 ARNTLO00327 626 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 LEFTY1O75610 366 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 EPCAMP16422 314 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 EPORP19235 508 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 JAK1P23458 1154 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 PLIN5Q00G26 463 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 CBX2Q14781 532 aaPredicted RBP13.62□□□□□ -0.23
MSH5-202ENST00000375740 KIAA0040Q15053 153 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 OXA1LQ15070 435 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 ZXDCQ2QGD7 858 aaPredicted RBP13.62□□□□□ -0.23
MSH5-202ENST00000375740 PIWIL3Q7Z3Z3 882 aaKnown RBP13.62□□□□□ -0.23
MSH5-202ENST00000375740 TRIM46Q7Z4K8 759 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 RALGPS2Q86X27 583 aaPredicted RBP13.62□□□□□ -0.23
MSH5-202ENST00000375740 PTRH1Q86Y79 214 aaKnown RBP13.62□□□□□ -0.23
MSH5-202ENST00000375740 ADGRG5Q8IZF4 528 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 RGL4Q8IZJ4 473 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 BPIFB6Q8NFQ5 453 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 FRS2Q8WU20 508 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 MRGPRX3Q96LB0 322 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 PPM1MQ96MI6 270 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 ALPK1Q96QP1 1244 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 FAM83DQ9H4H8 585 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 SLC32A1Q9H598 525 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 TBC1D14Q9P2M4 693 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 EIF3LQ9Y262 564 aaKnown RBP13.62□□□□□ -0.23
MSH5-202ENST00000375740 PDE4DIPQ5VU43 2346 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 ZFC3H1O60293 1989 aaKnown RBP13.62□□□□□ -0.23
MSH5-202ENST00000375740 A6NL46 340 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 INPP4BO15327 924 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 KDM1AO60341 852 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 WDR47O94967 919 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 CCNA2P20248 432 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 TCEA1P23193 301 aaKnown RBP13.62□□□□□ -0.23
MSH5-202ENST00000375740 PSMA4P25789 261 aaKnown RBP13.62□□□□□ -0.23
MSH5-202ENST00000375740 OXTRP30559 389 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 OPRL1P41146 370 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 IFITM3Q01628 133 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 PTGR1Q14914 329 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 SLC36A3Q495N2 470 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 ZNF697Q5TEC3 545 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 BRAT1Q6PJG6 821 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 SERPINA13PQ6UXR4 307 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 Q6ZVL8 140 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 PLPP6Q8IY26 295 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 ZNF784Q8NCA9 323 aaPredicted RBP13.62□□□□□ -0.23
MSH5-202ENST00000375740 ASB11Q8WXH4 323 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 RAD9AQ99638 391 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 SLC12A9Q9BXP2 914 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 PARVBQ9HBI1 364 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 DGKBQ9Y6T7 804 aa13.62□□□□□ -0.23
MSH5-202ENST00000375740 SEC22BO75396 215 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 CLDN9O95484 217 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 ENO2P09104 434 aaPredicted RBP13.61□□□□□ -0.23
MSH5-202ENST00000375740 TIMP2P16035 220 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 VIPR1P32241 457 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 GNPDA1P46926 289 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 BOP1Q14137 746 aaKnown RBP13.61□□□□□ -0.23
MSH5-202ENST00000375740 GBX1Q14549 363 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 CPSF6Q16630 551 aaKnown RBP eCLIP13.61□□□□□ -0.23
MSH5-202ENST00000375740 CYP51A1Q16850 503 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 GRASPQ7Z6J2 395 aaPredicted RBP13.61□□□□□ -0.23
MSH5-202ENST00000375740 KIAA0907Q7Z7F0 614 aaPredicted RBP13.61□□□□□ -0.23
MSH5-202ENST00000375740 TMCO5AQ8N6Q1 288 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 Q8N9G6 341 aaPredicted RBP13.61□□□□□ -0.23
MSH5-202ENST00000375740 GOLM1Q8NBJ4 401 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 ING5Q8WYH8 240 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 SGCDQ92629 289 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 MUC13Q9H3R2 512 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 ACTR8Q9H981 624 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 ZFP14Q9HCL3 533 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 PCDH12Q9NPG4 1184 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 ATAD3AQ9NVI7 634 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 RNF103-CHMP3A0A140T963 221 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 TCRBV5S2A0A599 114 aa13.61□□□□□ -0.23
MSH5-202ENST00000375740 GRXCR2A6NFK2 248 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms