RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 SLC13A3Q8WWT9 602 aa16.78■□□□□ 0.28
MCF2L-203ENST00000375604 SNED1Q8TER0 1413 aa16.78■□□□□ 0.28
MCF2L-203ENST00000375604 DYTNA2CJ06 578 aa16.78■□□□□ 0.28
MCF2L-203ENST00000375604 STK19P49842 368 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-203ENST00000375604 HERVK_113P63132 956 aa16.78■□□□□ 0.28
MCF2L-203ENST00000375604 USP30Q70CQ3 517 aa16.78■□□□□ 0.28
MCF2L-203ENST00000375604 ANKRD27Q96NW4 1050 aa16.78■□□□□ 0.28
MCF2L-203ENST00000375604 ERVK-6Q9BXR3 956 aa16.78■□□□□ 0.28
MCF2L-203ENST00000375604 RHCGQ9UBD6 479 aa16.78■□□□□ 0.28
MCF2L-203ENST00000375604 ZNF823P16415 610 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 HTR7P34969 479 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 KHDC1Q4VXA5 237 aaKnown RBP16.77■□□□□ 0.28
MCF2L-203ENST00000375604 ALG1LQ6GMV1 187 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 OR5T3Q8NGG3 340 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 NFKBIDQ8NI38 313 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 SMOQ99835 787 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 C1QTNF1Q9BXJ1 281 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 XKR8Q9H6D3 395 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 A0A0U1RQF3 1178 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 UPK3BL1B0FP48 263 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 UPK3BL2E5RIL1 263 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 SLC6A9P48067 706 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 C1orf94Q6P1W5 598 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 PKP4Q99569 1192 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 SPATA9Q9BWV2 254 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 AKTIPQ9H8T0 292 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 GALPQ9UBC7 116 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 PLK4O00444 970 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 CCNOP22674 350 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 FOXN2P32314 431 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 NDUFA5Q16718 116 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 ZNF792Q3KQV3 632 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 MSS51Q4VC12 460 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 GOLGA7Q7Z5G4 137 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 PAAF1Q9BRP4 392 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 RNF11Q9Y3C5 154 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 COMMD3-BMI1R4GMX3 469 aa16.77■□□□□ 0.28
MCF2L-203ENST00000375604 REM1O75628 298 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 AAGABQ6PD74 315 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 ZCCHC12Q6PEW1 402 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 MEIOBQ8N635 442 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 ZNF296Q8WUU4 475 aaPredicted RBP16.77■□□□□ 0.27
MCF2L-203ENST00000375604 NSMCE3Q96MG7 304 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 PEBP4Q96S96 227 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 GPATCH1Q9BRR8 931 aaKnown RBP16.77■□□□□ 0.27
MCF2L-203ENST00000375604 DENND2DQ9H6A0 471 aaPredicted RBP16.77■□□□□ 0.27
MCF2L-203ENST00000375604 INSL5Q9Y5Q6 135 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 LOC730098B7Z3J9 87 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 POP7O75817 140 aaKnown RBP16.77■□□□□ 0.27
MCF2L-203ENST00000375604 UBXN7O94888 489 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 TRAP1Q12931 704 aaKnown RBP16.77■□□□□ 0.27
MCF2L-203ENST00000375604 LAPTM4AQ15012 233 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 YTHDF3Q7Z739 585 aaKnown RBP16.77■□□□□ 0.27
MCF2L-203ENST00000375604 NAT8LQ8N9F0 302 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 CDKN2AIPNLQ96HQ2 116 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 CHIAQ9BZP6 476 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 HSD3B7Q9H2F3 369 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 FZD3Q9NPG1 666 aa16.77■□□□□ 0.27
MCF2L-203ENST00000375604 RGPD8O14715 1765 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-203ENST00000375604 ELOA3DA6NLF2 546 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-203ENST00000375604 CPNE3O75131 537 aaKnown RBP16.76■□□□□ 0.27
MCF2L-203ENST00000375604 CLPXO76031 633 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 ELOA3BQ3SY89 546 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 ZNF627Q7L945 461 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 P4HA3Q7Z4N8 544 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 ELOA3Q8NG57 546 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 BADQ92934 168 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 SMPD3Q9NY59 655 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-203ENST00000375604 A0A1B0GVT2 93 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 SMIM30A4D0T7 59 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 MYADML2A6NDP7 307 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 ZNF432O94892 652 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 PAPSS2O95340 614 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-203ENST00000375604 KLF8O95600 359 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-203ENST00000375604 CCNHP51946 323 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-203ENST00000375604 ACTR3P61158 418 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 LINGO2Q7L985 606 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 CADM1Q9BY67 442 aaKnown RBP16.76■□□□□ 0.27
MCF2L-203ENST00000375604 TBC1D24Q9ULP9 559 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 PMF1-BGLAPU3KQ54 211 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 FAM172BPA6NC97 362 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 AGTR2P50052 363 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 RPS6KA3P51812 740 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 PRRT3Q5FWE3 981 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 THAP3Q8WTV1 239 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-203ENST00000375604 SLC22A17Q8WUG5 538 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 TRIM63Q969Q1 353 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 FBXL18Q96ME1 805 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 PDLIM1O00151 329 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 SLC7A4O43246 635 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 OR1I1O60431 355 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 BEST1O76090 585 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 MPIP34949 423 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 LY6G5CQ5SRR4 150 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.76■□□□□ 0.273e-6■□□□□ 10.2
MCF2L-203ENST00000375604 OR2L3Q8NG85 312 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 TOP1MTQ969P6 601 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 TMEM203Q969S6 136 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 FCRL5Q96RD9 977 aa16.76■□□□□ 0.27
MCF2L-203ENST00000375604 BTBD1Q9H0C5 482 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms