RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 MRPS26Q9BYN8 205 aaKnown RBP15.15■□□□□ 0.02
CCDC40-202ENST00000374876 CEP44Q9C0F1 390 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 NDUFA13Q9P0J0 144 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 OPTCQ9UBM4 332 aa15.15■□□□□ 0.02
CCDC40-202ENST00000374876 NPIPB15A6NHN6 443 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 LSM1O15116 133 aaKnown RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 INPP4BO15327 924 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 GPIP06744 558 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 CTSLP07711 333 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 G6PDP11413 515 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 CKMT2P17540 419 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 FASP25445 335 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 GSTT1P30711 240 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 RPL5P46777 297 aaKnown RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 METAP1P53582 386 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 PTPN5P54829 565 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 EEFSECP57772 596 aaKnown RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 ELAVL3Q14576 367 aaKnown RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 ABRAXAS2Q15018 415 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 PHKG1Q16816 387 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 AP5B1Q2VPB7 878 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 AASDHQ4L235 1098 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 SULT1C3Q6IMI6 304 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 NANOGP8Q6NSW7 305 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 CHERPQ8IWX8 916 aaKnown RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 KIAA2013Q8IYS2 634 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 SPDYE1Q8NFV5 336 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 FAM110BQ8TC76 370 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 PRPF18Q99633 342 aaKnown RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 CD244Q9BZW8 370 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 NANOGQ9H9S0 305 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 LATS2Q9NRM7 1088 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 SLAMF8Q9P0V8 285 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 CYP8B1Q9UNU6 501 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 CCDC163A0A0D9SF12 145 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 ACADMP11310 421 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 MSH3P20585 1137 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 RECQLP46063 649 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 SEMG2Q02383 582 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 CYP51A1Q16850 503 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 MYLK3Q32MK0 819 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 THEMIS2Q5TEJ8 643 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 ZNF776Q68DI1 518 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 PPP4R4Q6NUP7 873 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 SLC2A7Q6PXP3 512 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 CRTC1Q6UUV9 634 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 CYP20A1Q6UW02 462 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 FAM124AQ86V42 546 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 PTRH1Q86Y79 214 aaKnown RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 GALNT15Q8N3T1 639 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 OR8D1Q8WZ84 308 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 ISG20Q96AZ6 181 aaKnown RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 PPP3R2Q96LZ3 170 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 TMEM74Q96NL1 305 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 LYSMD1Q96S90 227 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 TMEM79Q9BSE2 394 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 KCNH6Q9H252 994 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 INTS7Q9NVH2 962 aaKnown RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 POLR3HQ9Y535 204 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-202ENST00000374876 PCDHGA2Q9Y5H1 932 aa15.14■□□□□ 0.01
CCDC40-202ENST00000374876 CXorf51AA0A1B0GTR3 108 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 SAC3D1A6NKF1 404 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 PLK4O00444 970 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 MID1O15344 667 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 TPST1O60507 370 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 DNTTP04053 509 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 MTHFD1P11586 935 aaKnown RBP15.13■□□□□ 0.01
CCDC40-202ENST00000374876 ATP6V1B1P15313 513 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 OXTRP30559 389 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 NSG1P42857 185 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 GDF5P43026 501 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 TPMTP51580 245 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 TXNL4AP83876 142 aaKnown RBP15.13■□□□□ 0.01
CCDC40-202ENST00000374876 CST6Q15828 149 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 USP39Q53GS9 565 aaKnown RBP15.13■□□□□ 0.01
CCDC40-202ENST00000374876 ARSIQ5FYB1 569 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 USP45Q70EL2 814 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 HID1Q8IV36 788 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 ADGRG5Q8IZF4 528 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 DPP10Q8N608 796 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 GPR26Q8NDV2 337 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 TRIM4Q9C037 500 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 ITM2CQ9NQX7 267 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 AGPAT4Q9NRZ5 378 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 SDK1Q7Z5N4 2213 aa15.13■□□□□ 0.01
CCDC40-202ENST00000374876 IFRD1O00458 451 aaPredicted RBP15.12■□□□□ 0.01
CCDC40-202ENST00000374876 SOCS2O14508 198 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 RGS14O43566 566 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 ENO2P09104 434 aaPredicted RBP15.12■□□□□ 0.01
CCDC40-202ENST00000374876 FCGR1AP12314 374 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 SLC2A4P14672 509 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 NCK1P16333 377 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 SOX11P35716 441 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 RFTN2Q52LD8 501 aaPredicted RBP15.12■□□□□ 0.01
CCDC40-202ENST00000374876 LRRC66Q68CR7 880 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 KRT80Q6KB66 452 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 PACRGLQ8N7B6 248 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 TRPV3Q8NET8 790 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 RHBDF1Q96CC6 855 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 SCRN2Q96FV2 425 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms