RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 VTCN1Q7Z7D3 282 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 TRIM74Q86UV6 250 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 ZDHHC4Q9NPG8 344 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 GALNT8Q9NY28 637 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 TDRKHQ9Y2W6 561 aaKnown RBP16.61■□□□□ 0.25
RXRB-201ENST00000374680 TRBV5-4A0A0C4DH59 114 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 CXCL14O95715 111 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 EFEMP2O95967 443 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 FTH1P02794 183 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 SDC1P18827 310 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 RUNDC3AQ59EK9 446 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 BORAQ6PGQ7 559 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 CYP2U1Q7Z449 544 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 GPR180Q86V85 440 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 MICU2Q8IYU8 434 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 C2orf73Q8N5S3 287 aaPredicted RBP16.6■□□□□ 0.25
RXRB-201ENST00000374680 FIBINQ8TAL6 211 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 VWCEQ96DN2 955 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 CCDC138Q96M89 665 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 PAIP1Q9H074 479 aaKnown RBP16.6■□□□□ 0.25
RXRB-201ENST00000374680 CLMPQ9H6B4 373 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 ITM2BQ9Y287 266 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 H3BMQ9 156 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 IL6P05231 212 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 LSM3P62310 102 aaKnown RBP16.6■□□□□ 0.25
RXRB-201ENST00000374680 IRF8Q02556 426 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 NAE1Q13564 534 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 GPR33Q49SQ1 333 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 ARSIQ5FYB1 569 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 CCNYL2Q5T2Q4 361 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 FAM180BQ6P0A1 224 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 RBM23Q86U06 439 aaKnown RBP16.6■□□□□ 0.25
RXRB-201ENST00000374680 CNIH3Q8TBE1 160 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 COG8Q96MW5 612 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 NTMT1Q9BV86 223 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 MUC13Q9H3R2 512 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 KAT8Q9H7Z6 458 aaKnown RBP16.6■□□□□ 0.25
RXRB-201ENST00000374680 VNN3Q9NY84 501 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 DGKBQ9Y6T7 804 aa16.6■□□□□ 0.25
RXRB-201ENST00000374680 TRAV19A0A0A6YYK7 116 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 TTC34A8MYJ7 566 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 XYLBO75191 536 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 FKBP9O95302 570 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 DCTN2Q13561 401 aaKnown RBP16.59■□□□□ 0.25
RXRB-201ENST00000374680 XKR6Q5GH73 641 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 SLC39A5Q6ZMH5 540 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 FKBP9P1Q75LS8 142 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 OR8J3Q8NGG0 315 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 ING5Q8WYH8 240 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 PANX1Q96RD7 426 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 FAM118AQ9NWS6 357 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 ERVK-11Q9UQG0 969 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 SAP18O00422 153 aaKnown RBP16.59■□□□□ 0.25
RXRB-201ENST00000374680 MAP4P27816 1152 aaKnown RBP16.59■□□□□ 0.25
RXRB-201ENST00000374680 SPINT3P49223 89 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 TRIM46Q7Z4K8 759 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 SYT12Q8IV01 421 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 ZC3H7AQ8IWR0 971 aaKnown RBP16.59■□□□□ 0.25
RXRB-201ENST00000374680 VOPP1Q96AW1 172 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 RIOK2Q9BVS4 552 aaKnown RBP16.59■□□□□ 0.25
RXRB-201ENST00000374680 REXO4Q9GZR2 422 aaKnown RBP16.59■□□□□ 0.25
RXRB-201ENST00000374680 RETREG1Q9H6L5 497 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 CD320Q9NPF0 282 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 WNT6Q9Y6F9 365 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 SOCS5O75159 536 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 PRSS23O95084 383 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 ATP1B2P14415 290 aaPredicted RBP16.59■□□□□ 0.25
RXRB-201ENST00000374680 AOAHP28039 575 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 NAA20P61599 178 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 MAD2L1Q13257 205 aaPredicted RBP16.59■□□□□ 0.25
RXRB-201ENST00000374680 CTU2Q2VPK5 515 aaKnown RBP16.59■□□□□ 0.25
RXRB-201ENST00000374680 C8orf59Q8N0T1 100 aaPredicted RBP16.59■□□□□ 0.25
RXRB-201ENST00000374680 TPD52L3Q96J77 140 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 WRAP53Q9BUR4 548 aaKnown RBP16.59■□□□□ 0.25
RXRB-201ENST00000374680 RIBC2Q9H4K1 309 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 SERHLQ9NQF3 203 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 COQ6Q9Y2Z9 468 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 SZT2Q5T011 3432 aa16.59■□□□□ 0.25
RXRB-201ENST00000374680 J3QRK9 145 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 LEFTY1O75610 366 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 NPPAP01160 153 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 CXCL10P02778 98 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 RECQLP46063 649 aaPredicted RBP16.58■□□□□ 0.24
RXRB-201ENST00000374680 BDKRB1P46663 353 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 IL5RAQ01344 420 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 COL9A2Q14055 689 aaPredicted RBP16.58■□□□□ 0.24
RXRB-201ENST00000374680 CARD16Q5EG05 197 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 THAP5Q7Z6K1 395 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 MIPOL1Q8TD10 442 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 UBE2FQ969M7 185 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 FBXL8Q96CD0 374 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 DNAJB9Q9UBS3 223 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 TRPS1Q9UHF7 1281 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 BTBD3Q9Y2F9 522 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 TANC1Q9C0D5 1861 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 PLK4O00444 970 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 GFRA2O00451 464 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 TULP3O75386 442 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 FGF18O76093 207 aa16.58■□□□□ 0.24
RXRB-201ENST00000374680 NUDT7P0C024 238 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms