RNA–Protein interactions for RNA: ENST00000372055.8

VEGFA-203, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,286 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-203ENST00000372055 TRIM55Q9BYV6 548 aa24.24■■□□□ 1.47
VEGFA-203ENST00000372055 ING2Q9H160 280 aa24.24■■□□□ 1.47
VEGFA-203ENST00000372055 CCDC68Q9H2F9 335 aa24.24■■□□□ 1.47
VEGFA-203ENST00000372055 ZCWPW2A0A1B0GU75 182 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 ZNF185O15231 689 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 PRICKLE3O43900 615 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-203ENST00000372055 DNAJB5O75953 348 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 MATN4O95460 622 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 CTSBP07858 339 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 TCP1P17987 556 aaKnown RBP24.23■■□□□ 1.47
VEGFA-203ENST00000372055 PTGIRP43119 386 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 LONRF1Q17RB8 773 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 TTLL9Q3SXZ7 439 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 CCSMST1Q4G0I0 132 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 MLIPQ5VWP3 458 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 CPZQ66K79 652 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 ASB18Q6ZVZ8 466 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 RAB43Q86YS6 212 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 CALML6Q8TD86 181 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 DENND1AQ8TEH3 1009 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 ZUFSPQ96AP4 578 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 GBP5Q96PP8 586 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 EPN3Q9H201 632 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 C20orf96Q9NUD7 363 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-203ENST00000372055 IFT80Q9P2H3 777 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-203ENST00000372055 DHCR7Q9UBM7 475 aaKnown RBP24.23■■□□□ 1.47
VEGFA-203ENST00000372055 NDOR1Q9UHB4 597 aa24.23■■□□□ 1.47
VEGFA-203ENST00000372055 NR1D1P20393 614 aa24.22■■□□□ 1.47
VEGFA-203ENST00000372055 ARSFP54793 590 aa24.22■■□□□ 1.47
VEGFA-203ENST00000372055 ACSBG2Q5FVE4 666 aa24.22■■□□□ 1.47
VEGFA-203ENST00000372055 FAM69BQ5VUD6 431 aa24.22■■□□□ 1.47
VEGFA-203ENST00000372055 FCRL6Q6DN72 434 aa24.22■■□□□ 1.47
VEGFA-203ENST00000372055 DENND6AQ8IWF6 608 aa24.22■■□□□ 1.47
VEGFA-203ENST00000372055 TEX19Q8NA77 164 aa24.22■■□□□ 1.47
VEGFA-203ENST00000372055 ANP32BQ92688 251 aaKnown RBP24.22■■□□□ 1.47
VEGFA-203ENST00000372055 SIGLEC10Q96LC7 697 aa24.22■■□□□ 1.47
VEGFA-203ENST00000372055 FBXO6Q9NRD1 293 aaPredicted RBP24.22■■□□□ 1.47
VEGFA-203ENST00000372055 FAM114A2Q9NRY5 505 aa24.22■■□□□ 1.47
VEGFA-203ENST00000372055 KLHL42Q9P2K6 505 aa24.22■■□□□ 1.47
VEGFA-203ENST00000372055 GALPQ9UBC7 116 aa24.22■■□□□ 1.47
VEGFA-203ENST00000372055 ASIC3Q9UHC3 531 aa24.22■■□□□ 1.47
VEGFA-203ENST00000372055 TLN1Q9Y490 2541 aaKnown RBP24.21■■□□□ 1.47
VEGFA-203ENST00000372055 TARM1B6A8C7 271 aa24.21■■□□□ 1.47
VEGFA-203ENST00000372055 K7EM74 188 aa24.21■■□□□ 1.47
VEGFA-203ENST00000372055 CCL11P51671 97 aa24.21■■□□□ 1.47
VEGFA-203ENST00000372055 CHAF1BQ13112 559 aa24.21■■□□□ 1.47
VEGFA-203ENST00000372055 CTBP1Q13363 440 aa24.21■■□□□ 1.47
VEGFA-203ENST00000372055 CYP2A13Q16696 494 aa24.21■■□□□ 1.47
VEGFA-203ENST00000372055 KLHL38Q2WGJ6 581 aa24.21■■□□□ 1.47
VEGFA-203ENST00000372055 TCTE1Q5JU00 501 aa24.21■■□□□ 1.47
VEGFA-203ENST00000372055 RNASEH2BQ5TBB1 312 aaKnown RBP24.21■■□□□ 1.47
VEGFA-203ENST00000372055 PCGF5Q86SE9 256 aa24.21■■□□□ 1.47
VEGFA-203ENST00000372055 OR9A1PQ8NGU1 263 aa24.21■■□□□ 1.47
VEGFA-203ENST00000372055 SLC25A23Q9BV35 468 aa24.21■■□□□ 1.47
VEGFA-203ENST00000372055 COMMD10Q9Y6G5 202 aa24.21■■□□□ 1.47
VEGFA-203ENST00000372055 SPTBP11277 2137 aa24.2■■□□□ 1.47
VEGFA-203ENST00000372055 CATP04040 527 aaKnown RBP24.2■■□□□ 1.46
VEGFA-203ENST00000372055 SLC1A2P43004 574 aa24.2■■□□□ 1.46
VEGFA-203ENST00000372055 CLCN7P51798 805 aa24.2■■□□□ 1.46
VEGFA-203ENST00000372055 NAA25Q14CX7 972 aa24.2■■□□□ 1.46
VEGFA-203ENST00000372055 NKAIN1Q4KMZ8 207 aa24.2■■□□□ 1.46
VEGFA-203ENST00000372055 NEK10Q6ZWH5 1172 aa24.2■■□□□ 1.46
VEGFA-203ENST00000372055 MED25Q71SY5 747 aa24.2■■□□□ 1.46
VEGFA-203ENST00000372055 AGGF1Q8N302 714 aaeCLIP24.2■■□□□ 1.46
VEGFA-203ENST00000372055 TMEM102Q8N9M5 508 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-203ENST00000372055 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.2■■□□□ 1.466e-6■■■■■ 47.7
VEGFA-203ENST00000372055 KCNJ9Q92806 393 aa24.2■■□□□ 1.46
VEGFA-203ENST00000372055 IP6K3Q96PC2 410 aa24.2■■□□□ 1.46
VEGFA-203ENST00000372055 MIPEPQ99797 713 aa24.2■■□□□ 1.46
VEGFA-203ENST00000372055 SELENOSQ9BQE4 189 aa24.2■■□□□ 1.46
VEGFA-203ENST00000372055 DDX47Q9H0S4 455 aaKnown RBP24.2■■□□□ 1.46
VEGFA-203ENST00000372055 G3BP2Q9UN86 482 aaKnown RBP24.2■■□□□ 1.46
VEGFA-203ENST00000372055 PCDHGA9Q9Y5G4 932 aaKnown RBP24.2■■□□□ 1.46
VEGFA-203ENST00000372055 KLK4Q9Y5K2 254 aa24.2■■□□□ 1.46
VEGFA-203ENST00000372055 FAM169AQ9Y6X4 670 aa24.2■■□□□ 1.46
VEGFA-203ENST00000372055 KRT87PA6NCN2 255 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 DNALI1O14645 258 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-203ENST00000372055 PSIP1O75475 530 aaKnown RBP24.19■■□□□ 1.46
VEGFA-203ENST00000372055 KLF7O75840 302 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-203ENST00000372055 ALAS2P22557 587 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 PSMB5P28074 263 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 FOLR3P41439 243 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 GRIA3P42263 894 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 PGDP52209 483 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 RRADP55042 308 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 PTK6Q13882 451 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 SSPNQ14714 243 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 YOD1Q5VVQ6 348 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-203ENST00000372055 TTC29Q8NA56 475 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-203ENST00000372055 OR2L3Q8NG85 312 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 GABPB2Q8TAK5 448 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-203ENST00000372055 SLCO2A1Q92959 643 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 FAM167BQ9BTA0 163 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 PCYOX1Q9UHG3 505 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 PTRH2Q9Y3E5 179 aaKnown RBP24.19■■□□□ 1.46
VEGFA-203ENST00000372055 SPTA1P02549 2419 aa24.19■■□□□ 1.46
VEGFA-203ENST00000372055 ARHGEF33A8MVX0 844 aa24.18■■□□□ 1.46
VEGFA-203ENST00000372055 ATXN8OSP0DMR3 200 aa24.18■■□□□ 1.46
VEGFA-203ENST00000372055 PIM1P11309 404 aaPredicted RBP24.18■■□□□ 1.46
VEGFA-203ENST00000372055 PGAM1P18669 254 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms