RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 KLHL6Q8WZ60 621 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 MND1Q9BWT6 205 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 RIMKLBQ9ULI2 386 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 ASB3Q9Y575 518 aa15.58■□□□□ 0.08
COL17A1-202ENST00000369733 NT5C1B-RDH14C9J2C7 533 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 DNAJB5O75953 348 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 SKP1P63208 163 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 NIPAL4Q0D2K0 466 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 INCA1Q0VD86 236 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 MAP2K5Q13163 448 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 HEPACAMQ14CZ8 416 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 DUOXA1Q1HG43 343 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 SPANXN4Q5MJ08 99 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 TRPM4Q8TD43 1214 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 KIAA1191Q96A73 305 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 TMIGD2Q96BF3 282 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 FRMD6Q96NE9 622 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 PHOX2BQ99453 314 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 RSPH9Q9H1X1 276 aaPredicted RBP15.57■□□□□ 0.08
COL17A1-202ENST00000369733 ITM2CQ9NQX7 267 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 PCDHGA3Q9Y5H0 932 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 ZNF879B4DU55 563 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 NDUFB5O43674 189 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 PNLIPRP1P54315 467 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 PITPNAQ00169 270 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 PMS2P3Q13401 168 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 ZNF181Q2M3W8 571 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 TAS1R3Q7RTX0 852 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 SLITRK4Q8IW52 837 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 BARD1Q99728 777 aaKnown RBP15.57■□□□□ 0.08
COL17A1-202ENST00000369733 NEK6Q9HC98 313 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 AASSQ9UDR5 926 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 ZNF214Q9UL59 606 aaPredicted RBP15.57■□□□□ 0.08
COL17A1-202ENST00000369733 KAT6AQ92794 2004 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 ISM1B1AKI9 464 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 HCRTO43612 131 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 REM1O75628 298 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 CHRNA1P02708 482 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 PRKCGP05129 697 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 GM2AP17900 193 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 MYF6P23409 242 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 OR1D2P34982 312 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 MAB21L1Q13394 359 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 LARS2Q15031 903 aaKnown RBP15.57■□□□□ 0.08
COL17A1-202ENST00000369733 NAPRTQ6XQN6 538 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 CYP2S1Q96SQ9 504 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 TLR6Q9Y2C9 796 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 J3KR12 359 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 PITPNM1O00562 1244 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 CDRT1O95170 752 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 HPRP00739 348 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 GMPRP36959 345 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 ETV4P43268 484 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 ABHD18Q0P651 414 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 CES5AQ6NT32 575 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 UGT2A3Q6UWM9 527 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 RPTNQ6XPR3 784 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 MOB2Q70IA6 237 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 OR10H4Q8NGA5 316 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 TSPEARQ8WU66 669 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 KCNK13Q9HB14 408 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 GPSM3Q9Y4H4 160 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 KCTD3Q9Y597 815 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 ARFGEF2Q9Y6D5 1785 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 URADA6NGE7 173 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 I3L521 148 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 ACSL1P33121 698 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 TNFAIP8L2Q6P589 184 aaPredicted RBP15.57■□□□□ 0.08
COL17A1-202ENST00000369733 CYS1Q717R9 158 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 TAF8Q7Z7C8 310 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 SLC15A3Q8IY34 581 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 OXR1Q8N573 874 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 ASCC1Q8N9N2 400 aaKnown RBP15.57■□□□□ 0.08
COL17A1-202ENST00000369733 LRCH3Q96II8 777 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 CORO1BQ9BR76 489 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 PAK1IP1Q9NWT1 392 aaPredicted RBP15.57■□□□□ 0.08
COL17A1-202ENST00000369733 CACNG4Q9UBN1 327 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 CMAHPQ9Y471 501 aa15.57■□□□□ 0.08
COL17A1-202ENST00000369733 CDK14O94921 469 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 SLITRK5O94991 958 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 GLUD1P00367 558 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 NFATC3Q12968 1075 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 MPPE1Q53F39 396 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 STEAP4Q687X5 459 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 ANKRD13BQ86YJ7 626 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 SLC15A4Q8N697 577 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 FIZ1Q96SL8 496 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 C1QTNF7Q9BXJ2 289 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 ERVK-18Q9QC07 812 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 TBC1D24Q9ULP9 559 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 ROBO1Q9Y6N7 1651 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 FUOMA2VDF0 154 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 CPSF4LA6NMK7 179 aaKnown RBP15.56■□□□□ 0.08
COL17A1-202ENST00000369733 WWP2O00308 870 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 IFNA16P05015 189 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 GRB7Q14451 532 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 RUNDC3AQ59EK9 446 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 AGMOQ6ZNB7 445 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 SNX20Q7Z614 316 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 SLC30A8Q8IWU4 369 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms