RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 PRR23BQ6ZRT6 265 aa15.43■□□□□ 0.06
LMNA-203ENST00000368297 ACAD11Q709F0 780 aa15.43■□□□□ 0.06
LMNA-203ENST00000368297 IL17FQ96PD4 163 aa15.43■□□□□ 0.06
LMNA-203ENST00000368297 RASSF4Q9H2L5 321 aa15.43■□□□□ 0.06
LMNA-203ENST00000368297 ZBTB26Q9HCK0 441 aa15.43■□□□□ 0.06
LMNA-203ENST00000368297 TMEM74BQ9NUR3 256 aa15.43■□□□□ 0.06
LMNA-203ENST00000368297 PILRBQ9UKJ0 227 aa15.43■□□□□ 0.06
LMNA-203ENST00000368297 ZDBF2Q9HCK1 2354 aa15.43■□□□□ 0.06
LMNA-203ENST00000368297 TNFRSF10AO00220 468 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 KDM1AO60341 852 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 PTPN4P29074 926 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 CCNG1P51959 295 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 SH3BP2P78314 561 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 GRB7Q14451 532 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 ZXDCQ2QGD7 858 aaPredicted RBP15.42■□□□□ 0.06
LMNA-203ENST00000368297 GPRIN3Q6ZVF9 776 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 MAVSQ7Z434 540 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 THOC6Q86W42 341 aaKnown RBP15.42■□□□□ 0.06
LMNA-203ENST00000368297 GKN2Q86XP6 184 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 TRIM48Q8IWZ4 208 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 LMNTD1Q8N9Z9 388 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 FAM46DQ8NEK8 389 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 AGAP11Q8TF27 550 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 ZC3H10Q96K80 434 aaKnown RBP15.42■□□□□ 0.06
LMNA-203ENST00000368297 SLC40A1Q9NP59 571 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 ARL8BQ9NVJ2 186 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 SPATA7Q9P0W8 599 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 SLC22A14Q9Y267 594 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 KMT2EQ8IZD2 1858 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 SPAG17Q6Q759 2223 aa15.42■□□□□ 0.06
LMNA-203ENST00000368297 TDRD6O60522 2096 aaKnown RBP15.42■□□□□ 0.06
LMNA-203ENST00000368297 A6NCN8 305 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 ZNF839A8K0R7 811 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 TMEM233B4DJY2 109 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 KATNA1O75449 491 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 OTCP00480 354 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 SLC2A4P14672 509 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 NDUFS1P28331 727 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 HSD17B2P37059 387 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 PKNOX1P55347 436 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 TBPL1P62380 186 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 TUBB3Q13509 450 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 KIF19Q2TAC6 998 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 THEMIS2Q5TEJ8 643 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 CAPN13Q6MZZ7 669 aaPredicted RBP15.41■□□□□ 0.06
LMNA-203ENST00000368297 SYVN1Q86TM6 617 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 SYT12Q8IV01 421 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 C2orf73Q8N5S3 287 aaPredicted RBP15.41■□□□□ 0.06
LMNA-203ENST00000368297 ZBTB44Q8NCP5 570 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 OR52B6Q8NGF0 335 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 OR56A3Q8NH54 315 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 ZNF382Q96SR6 550 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 CCDC28BQ9BUN5 200 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 TCF7L2Q9NQB0 619 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.41■□□□□ 0.067e-7■■□□□ 13.7
LMNA-203ENST00000368297 ZNF624Q9P2J8 865 aaPredicted RBP15.41■□□□□ 0.06
LMNA-203ENST00000368297 TRAF6Q9Y4K3 522 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 SNX11Q9Y5W9 270 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 PRAMEF33A0A0G2JMD5 474 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 CAPN14A8MX76 684 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 B4DGG1 531 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 OR7A17O14581 309 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 AZIN1O14977 448 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 AQP9O43315 295 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 SDC3O75056 442 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 OR4F21O95013 312 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 ESRRBO95718 433 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 NCF2P19878 526 aaPredicted RBP15.41■□□□□ 0.06
LMNA-203ENST00000368297 CTSKP43235 329 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 CDC16Q13042 620 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 ARHGAP19Q14CB8 494 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 VWA5B1Q5TIE3 1220 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 CLEC6AQ6EIG7 209 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 IYDQ6PHW0 289 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 MILR1Q7Z6M3 343 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 KLHDC8AQ8IYD2 350 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 DCBLD1Q8N8Z6 715 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 OR52E1Q8NGJ3 308 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 ZDHHC1Q8WTX9 485 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 PTCD3Q96EY7 689 aaKnown RBP15.41■□□□□ 0.06
LMNA-203ENST00000368297 CDK15Q96Q40 435 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 CCDC106Q9BWC9 280 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 RAB11FIP5Q9BXF6 653 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 XKR8Q9H6D3 395 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 TNFRSF12AQ9NP84 129 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 CCDC177Q9NQR7 707 aaPredicted RBP15.41■□□□□ 0.06
LMNA-203ENST00000368297 INTS7Q9NVH2 962 aaKnown RBP15.41■□□□□ 0.06
LMNA-203ENST00000368297 ARMCX1Q9P291 453 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 TAGLN3Q9UI15 199 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 PCDHGA2Q9Y5H1 932 aa15.41■□□□□ 0.06
LMNA-203ENST00000368297 GON4LQ3T8J9 2241 aa15.4■□□□□ 0.06
LMNA-203ENST00000368297 OR5K4A6NMS3 321 aa15.4■□□□□ 0.06
LMNA-203ENST00000368297 E7ENX8 843 aa15.4■□□□□ 0.06
LMNA-203ENST00000368297 VIPP01282 170 aa15.4■□□□□ 0.06
LMNA-203ENST00000368297 CFIP05156 583 aa15.4■□□□□ 0.06
LMNA-203ENST00000368297 PRDX3P30048 256 aaKnown RBP15.4■□□□□ 0.06
LMNA-203ENST00000368297 SLC19A1P41440 591 aa15.4■□□□□ 0.06
LMNA-203ENST00000368297 MNAT1P51948 309 aa15.4■□□□□ 0.06
LMNA-203ENST00000368297 TAP2Q03519 686 aa15.4■□□□□ 0.06
LMNA-203ENST00000368297 FASTKQ14296 549 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms