RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 CATP04040 527 aaKnown RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 LIFP15018 202 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 WT1P19544 449 aaPredicted RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 OAS2P29728 719 aaKnown RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 PEBP1P30086 187 aaKnown RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 HSD17B2P37059 387 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 STAT5AP42229 794 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 PLTPP55058 493 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 TIAL1Q01085 375 aaKnown RBP eCLIP9.5□□□□□ -0.89
CD48-202ENST00000368046 MGAT5Q09328 741 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 ARHGAP19Q14CB8 494 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 CYP2A13Q16696 494 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 WHAMMP3Q1A5X7 153 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 LRRC8EQ6NSJ5 796 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 CDHR3Q6ZTQ4 885 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 TMEM126BQ8IUX1 230 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 DNAJC22Q8N4W6 341 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 C19orf47Q8N9M1 422 aaKnown RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 LMNTD1Q8N9Z9 388 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 OR1L3Q8NH93 324 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 GIMAP7Q8NHV1 300 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 CD200R1Q8TD46 325 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 EEF1AKMT1Q8WVE0 214 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 ZNF592Q92610 1267 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 N4BP2L2Q92802 583 aaPredicted RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 TRIM44Q96DX7 344 aaPredicted RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 IL17FQ96PD4 163 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 WDR83Q9BRX9 315 aaKnown RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 SLC12A9Q9BXP2 914 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 KLHL25Q9H0H3 589 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 AKIRIN1Q9H9L7 192 aaPredicted RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 GPN2Q9H9Y4 310 aaPredicted RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 FAM60AQ9NP50 221 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 LHX9Q9NQ69 397 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 FAM114A2Q9NRY5 505 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 GRHL1Q9NZI5 618 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 SPATA7Q9P0W8 599 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 TRMT6Q9UJA5 497 aaKnown RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 KCND3Q9UK17 655 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 CORO1CQ9ULV4 474 aaPredicted RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 RUVBL2Q9Y230 463 aaKnown RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 VWA7Q9Y334 891 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 PCDHB3Q9Y5E6 796 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 CFAP47Q6ZTR5 3102 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 ZNF839A8K0R7 811 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 ARHGEF33A8MVX0 844 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 TMEM150CB9EJG8 249 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 ERVH48-1M5A8F1 160 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 CPNE3O75131 537 aaKnown RBP9.49□□□□□ -0.89
CD48-202ENST00000368046 RECKO95980 971 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 KLK3P07288 261 aaPredicted RBP9.49□□□□□ -0.89
CD48-202ENST00000368046 HBQ1P09105 142 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 TCN2P20062 427 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 BDKRB1P46663 353 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 GABRA4P48169 554 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 RGS4P49798 205 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 MC1RQ01726 317 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 ILF2Q12905 390 aaKnown RBP9.49□□□□□ -0.89
CD48-202ENST00000368046 CUL1Q13616 776 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 FASTKD3Q14CZ7 662 aaKnown RBP9.49□□□□□ -0.89
CD48-202ENST00000368046 ZIC1Q15915 447 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 SOWAHCQ53LP3 525 aaPredicted RBP9.49□□□□□ -0.89
CD48-202ENST00000368046 KIAA1614Q5VZ46 1190 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 FIGLAQ6QHK4 219 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 PAQR3Q6TCH7 311 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 C3orf62Q6ZUJ4 267 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 TRIM73Q86UV7 250 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 SLC26A11Q86WA9 606 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 GPR135Q8IZ08 494 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 SLC38A9Q8NBW4 561 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 OR2A1Q8NGT9 310 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 DENND1AQ8TEH3 1009 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 LRFN5Q96NI6 719 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 PKP4Q99569 1192 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 NDNQ99608 321 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 LRRC1Q9BTT6 524 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 FAM117AQ9C073 453 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 SAYSD1Q9NPB0 183 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 INTS7Q9NVH2 962 aaKnown RBP9.49□□□□□ -0.89
CD48-202ENST00000368046 NSMCE4AQ9NXX6 385 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 ZFATQ9P243 1243 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 PLCL2Q9UPR0 1127 aa9.49□□□□□ -0.89
CD48-202ENST00000368046 A0A1W2PPV9 198 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 ZNF891A8MT65 544 aaPredicted RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 C21orf140B9A014 251 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 E7EQ34 232 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 H3BMH7 237 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 MYO1CO00159 1063 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 MEN1O00255 615 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 ATXN7O15265 892 aaPredicted RBP9.48□□□□□ -0.89
CD48-202ENST00000368046 SLC16A5O15375 505 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 ZNF749O43361 778 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 ITGB2P05107 769 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 GSTA2P09210 222 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 ERGP11308 486 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 CYP2A7P20853 494 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 MAGP20916 626 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 F8A1P23610 371 aa9.48□□□□□ -0.89
CD48-202ENST00000368046 MCM3P25205 808 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms