RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ZNF106Q9H2Y7 1883 aaKnown RBP13.93□□□□□ -0.18
CD48-201ENST00000368045 EVPLLA8MZ36 301 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 SLC1A7O00341 560 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 PRRG1O14668 218 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 BCKDKO14874 412 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 HTR1AP08908 422 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 HIST1H2AGP0C0S8 130 aaPredicted RBP13.92□□□□□ -0.18
CD48-201ENST00000368045 ZNF182P17025 639 aaPredicted RBP13.92□□□□□ -0.18
CD48-201ENST00000368045 HIST1H2ADP20671 130 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 AOAHP28039 575 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 SNRPD1P62314 119 aaKnown RBP13.92□□□□□ -0.18
CD48-201ENST00000368045 LAPTM5Q13571 262 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 ACOX1Q15067 660 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 MPPE1Q53F39 396 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 ERICH5Q6P6B1 374 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 LINC00299Q6ZSB3 139 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 RBM23Q86U06 439 aaKnown RBP13.92□□□□□ -0.18
CD48-201ENST00000368045 TCEAL8Q8IYN2 117 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 PHACTR4Q8IZ21 702 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 ADGRG2Q8IZP9 1017 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 GPR26Q8NDV2 337 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 BPIFB6Q8NFQ5 453 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 CLHC1Q8NHS4 586 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 FIBINQ8TAL6 211 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 GIPC3Q8TF64 312 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 ASB11Q8WXH4 323 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 NELL1Q92832 810 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 HHIPL1Q96JK4 782 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 COX4I2Q96KJ9 171 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 HIST1H2AHQ96KK5 128 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 NODALQ96S42 347 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 HIST1H2AJQ99878 128 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 H2AFJQ9BTM1 129 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 HERC2P3Q9BVR0 1158 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 TM9SF3Q9HD45 589 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 SLC6A13Q9NSD5 602 aa13.92□□□□□ -0.18
CD48-201ENST00000368045 NPIPB15A6NHN6 443 aaPredicted RBP13.91□□□□□ -0.18
CD48-201ENST00000368045 RFXANKO14593 260 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 MRPS14O60783 128 aaKnown RBP13.91□□□□□ -0.18
CD48-201ENST00000368045 CXCL10P02778 98 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 SDC1P18827 310 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 PRPS1L1P21108 318 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 CCR7P32248 378 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 AP1S2P56377 157 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 SRSF11Q05519 484 aaKnown RBP13.91□□□□□ -0.18
CD48-201ENST00000368045 MTAPQ13126 283 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 SPIDRQ14159 915 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 PLEKHS1Q5SXH7 462 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 LAIR2Q6ISS4 152 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 XKR5Q6UX68 686 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 MBOAT1Q6ZNC8 495 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 HTR3DQ70Z44 454 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 DET1Q7L5Y6 550 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 TMEM179BQ7Z7N9 219 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 ANKRD13BQ86YJ7 626 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 ZDHHC21Q8IVQ6 265 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 CHPFQ8IZ52 775 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 HS3ST5Q8IZT8 346 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 ARL14EPQ8N8R7 260 aaPredicted RBP13.91□□□□□ -0.18
CD48-201ENST00000368045 PIK3C3Q8NEB9 887 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 RAET1EQ8TD07 263 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 FKBP10Q96AY3 582 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 ECHDC3Q96DC8 303 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 ASIC4Q96FT7 647 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 MCCC1Q96RQ3 725 aaPredicted RBP13.91□□□□□ -0.18
CD48-201ENST00000368045 SLC22A12Q96S37 553 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 DNAJC11Q9NVH1 559 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 ENPP5Q9UJA9 477 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 UTS2RQ9UKP6 389 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 BAG5Q9UL15 447 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 A0A1W2PQ67 120 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 KPNA5O15131 536 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 ZNF821O75541 412 aaPredicted RBP13.91□□□□□ -0.18
CD48-201ENST00000368045 JUNDP17535 347 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 AMD1P17707 334 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 IGFBP5P24593 272 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 BMXP51813 675 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 ARHGDIAP52565 204 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 CXCR4P61073 352 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 B4GALNT1Q00973 533 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 GSTM4Q03013 218 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 LMAN2Q12907 356 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 CSTF3Q12996 717 aaKnown RBP13.91□□□□□ -0.18
CD48-201ENST00000368045 KEAP1Q14145 624 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 DUOXA1Q1HG43 343 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 PLEKHG6Q3KR16 790 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 DGKKQ5KSL6 1271 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 CPZQ66K79 652 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 CES5AQ6NT32 575 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 C16orf87Q6PH81 154 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 NEK10Q6ZWH5 1172 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 TSPAN33Q86UF1 283 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 ZSWIM9Q86XI8 627 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 MTFMTQ96DP5 389 aaKnown RBP13.91□□□□□ -0.18
CD48-201ENST00000368045 FAM210AQ96ND0 272 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 INPP5KQ9BT40 448 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 HMX1Q9NP08 348 aaPredicted RBP13.91□□□□□ -0.18
CD48-201ENST00000368045 RPS6KA6Q9UK32 745 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 PPT2Q9UMR5 302 aa13.91□□□□□ -0.18
CD48-201ENST00000368045 AP1M2Q9Y6Q5 423 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms