RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 UFM1P61960 85 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 RPL38P63173 70 aaKnown RBP10.59□□□□□ -0.71
H3F3A-202ENST00000366814 MS4A2Q01362 244 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 GAS6Q14393 721 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 IL23RQ5VWK5 629 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 NAIF1Q69YI7 327 aaPredicted RBP10.59□□□□□ -0.71
H3F3A-202ENST00000366814 RAET1GQ6H3X3 334 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 CYP20A1Q6UW02 462 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 TRIM46Q7Z4K8 759 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 RETREG3Q86VR2 466 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 ZFAND4Q86XD8 727 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 DHFR2Q86XF0 187 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 CXorf40AQ8TE69 158 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 ZNF514Q96K75 400 aaPredicted RBP10.59□□□□□ -0.71
H3F3A-202ENST00000366814 GPATCH1Q9BRR8 931 aaKnown RBP10.59□□□□□ -0.71
H3F3A-202ENST00000366814 VCXQ9H320 206 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 IL1RL2Q9HB29 575 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 PRMT8Q9NR22 394 aaPredicted RBP10.59□□□□□ -0.71
H3F3A-202ENST00000366814 ZSCAN32Q9NX65 697 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 ABCD2Q9UBJ2 740 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 CD300AQ9UGN4 299 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 ITM2BQ9Y287 266 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 RNF11Q9Y3C5 154 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 MUC22E2RYF6 1773 aaPredicted RBP10.59□□□□□ -0.71
H3F3A-202ENST00000366814 PRORSD1PA6NEY8 169 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 H3BNX3 289 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 INPP4BO15327 924 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 TSPAN6O43657 245 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 PEX1O43933 1283 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 SEC22BO75396 215 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 PSIP1O75475 530 aaKnown RBP10.59□□□□□ -0.71
H3F3A-202ENST00000366814 HSD17B1P14061 328 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 NDUFV2P19404 249 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 JAK1P23458 1154 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 MAPK1P28482 360 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 MSX2P35548 267 aaPredicted RBP10.59□□□□□ -0.71
H3F3A-202ENST00000366814 CASP2P42575 452 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 SLC6A12P48065 614 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 PLOD1Q02809 727 aaPredicted RBP10.59□□□□□ -0.71
H3F3A-202ENST00000366814 GAB4Q2WGN9 574 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 PTCHD3Q3KNS1 767 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 GRAMD1BQ3KR37 738 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 TMEM220Q6QAJ8 160 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 ERN2Q76MJ5 926 aaKnown RBP10.59□□□□□ -0.71
H3F3A-202ENST00000366814 ASCL5Q7RTU5 278 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 VRK3Q8IV63 474 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 BEND7Q8N7W2 519 aaPredicted RBP10.59□□□□□ -0.71
H3F3A-202ENST00000366814 RASGEF1AQ8N9B8 481 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 GLB1L3Q8NCI6 653 aaPredicted RBP10.59□□□□□ -0.71
H3F3A-202ENST00000366814 FAM156AQ8NDB6 213 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 SELENOMQ8WWX9 145 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 USP7Q93009 1102 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 ARRDC3Q96B67 414 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 FBXL8Q96CD0 374 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 CCDC138Q96M89 665 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 TMEM245Q9H330 911 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 LRTM1Q9HBL6 345 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 MAP10Q9P2G4 905 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 FAM8A1Q9UBU6 413 aa10.59□□□□□ -0.71
H3F3A-202ENST00000366814 RIF1Q5UIP0 2472 aaKnown RBP10.58□□□□□ -0.72
H3F3A-202ENST00000366814 PRR23AA6NEV1 266 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 LIN7AO14910 233 aaPredicted RBP10.58□□□□□ -0.72
H3F3A-202ENST00000366814 AREL1O15033 823 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 SGTAO43765 313 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 UGDHO60701 494 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 RNASEH1O60930 286 aaKnown RBP10.58□□□□□ -0.72
H3F3A-202ENST00000366814 RECQL5O94762 991 aaPredicted RBP10.58□□□□□ -0.72
H3F3A-202ENST00000366814 APODP05090 189 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 EPHX1P07099 455 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 C8BP07358 591 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 G6PDP11413 515 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 C6P13671 934 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 GRIA2P42262 883 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 ATXN3P54252 364 aaPredicted RBP10.58□□□□□ -0.72
H3F3A-202ENST00000366814 RHDQ02161 417 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 CREB5Q02930 508 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 ZNF33BQ06732 778 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 DPTQ07507 201 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 KLC1Q07866 573 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 CPSF6Q16630 551 aaKnown RBP eCLIP10.58□□□□□ -0.72
H3F3A-202ENST00000366814 FBXO43Q4G163 708 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 TMEM52BQ4KMG9 183 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 BCL7AQ4VC05 210 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 TIGD2Q4W5G0 525 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 SGO1Q5FBB7 561 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 IRGCQ6NXR0 463 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 NLRP8Q86W28 1048 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 ICA1LQ8NDH6 482 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 PROKR1Q8TCW9 393 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 ZUFSPQ96AP4 578 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 HBEGFQ99075 208 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 SLC39A3Q9BRY0 314 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 HDAC8Q9BY41 377 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 DPY30Q9C005 99 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 C1orf109Q9NX04 203 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 ASIC5Q9NY37 505 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 THAP10Q9P2Z0 257 aaPredicted RBP10.58□□□□□ -0.72
H3F3A-202ENST00000366814 PCDHGA2Q9Y5H1 932 aa10.58□□□□□ -0.72
H3F3A-202ENST00000366814 C9JVG2 144 aa10.57□□□□□ -0.72
H3F3A-202ENST00000366814 H3BM21 787 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms