RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SNX33Q8WV41 574 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 MND1Q9BWT6 205 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 PFDN2Q9UHV9 154 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 FAM186AA6NE01 2351 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 ZBTB11O95625 1053 aaPredicted RBP11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 TMBIM6P55061 237 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 EGFLAMQ63HQ2 1017 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 PAQR3Q6TCH7 311 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 KLHL24Q6TFL4 600 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 IFNLR1Q8IU57 520 aaPredicted RBP11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 BCL7BQ9BQE9 202 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 CCM2Q9BSQ5 444 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 SLC22A4Q9H015 551 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 PCDHGA2Q9Y5H1 932 aa11.77□□□□□ -0.52
CDC42BPA-203ENST00000366766 STBD1O95210 358 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 LATS1O95835 1130 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 ARHGDIBP52566 201 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 SLITRK4Q8IW52 837 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 KLHL32Q96NJ5 620 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 TM9SF3Q9HD45 589 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 TELO2Q9Y4R8 837 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 CLIC1O00299 241 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 OAS1P00973 400 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 ATP5A1P25705 553 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 SMSP52788 366 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 CAP1Q01518 475 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 ABHD13Q7L211 337 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 ATCAYQ86WG3 371 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 C11orf84Q9BUA3 381 aaPredicted RBP11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 PCM1Q15154 2024 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 NRAPQ86VF7 1730 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 ARHGEF15O94989 841 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF33BQ06732 778 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 FADDQ13158 208 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 FAM171BQ6P995 826 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 SNIP1Q8TAD8 396 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 HDAC2Q92769 488 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 CLPXO76031 633 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 GPX6P59796 221 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 SUZ12Q15022 739 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 HPS1Q92902 700 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 CMTM7Q96FZ5 175 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 ABHD14A-ACY1A0A1B0GW23 586 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 SLC16A5O15375 505 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 MYBPC1Q00872 1141 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 DENND1AQ8TEH3 1009 aa11.77□□□□□ -0.53
CDC42BPA-203ENST00000366766 TAS2R43P59537 309 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 PLEKHS1Q5SXH7 462 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 SMG7Q92540 1137 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 TAMM41Q96BW9 452 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 CPQQ9Y646 472 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF879B4DU55 563 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 IL7RP16871 459 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 C1QTNF8P60827 252 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 CARD16Q5EG05 197 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 ATAT1Q5SQI0 421 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 OR2AP1Q8NGE2 309 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 CNDP2Q96KP4 475 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 RHBGQ9H310 441 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF541Q9H0D2 1346 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 HRH2P25021 359 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 NOVP48745 357 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 GSK3BP49841 420 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 ERVK-21P61565 698 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 TMEM214Q6NUQ4 689 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 COX18Q8N8Q8 333 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 SMG8Q8ND04 991 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 MEAF6Q9HAF1 191 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 OAS3Q9Y6K5 1087 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 PIRO00625 290 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 TLX3O43711 291 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 PRAMEF11O60813 436 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 RSL1D1O76021 490 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 GALK1P51570 392 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 NDRG1Q92597 394 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 HS3ST4Q9Y661 456 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 HSPE1-MOB4S4R3N1 261 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 EDDM13A0A1B0GTR0 161 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 ALPPP05187 535 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 PABPC4LP0CB38 370 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 RBBP4Q09028 425 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 TRAM1Q15629 374 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 CCDC107Q8WV48 283 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 KLHL6Q8WZ60 621 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 EXOSC8Q96B26 276 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 TOP3BO95985 862 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 IRF9Q00978 393 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 XKRXQ6PP77 449 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 C15orf39Q6ZRI6 1047 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 UMODL1-AS1Q8N2C9 162 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 OR6K2Q8NGY2 324 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 LRRN4Q8WUT4 740 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 NCSTNQ92542 709 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 PCDHGA10Q9Y5H3 936 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 XKP51811 444 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 CCNHP51946 323 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 CA9Q16790 459 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 SYPL2Q5VXT5 272 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 KIAA1614Q5VZ46 1190 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms