RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 THAP8Q8NA92 274 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 SMAP2Q8WU79 429 aaPredicted RBP3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 PIGBQ92521 554 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 THOC1Q96FV9 657 aaKnown RBP3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 ZNF486Q96H40 463 aaPredicted RBP3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 FAM20AQ96MK3 541 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 AGAP3Q96P47 875 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 PKP2Q99959 881 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 DGCR6LQ9BY27 220 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 FGFBP2Q9BYJ0 223 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 CPVLQ9H3G5 476 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 GKN1Q9NS71 199 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 ERAP1Q9NZ08 941 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 STUB1Q9UNE7 303 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 PPP1R3CQ9UQK1 317 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 IPO8O15397 1037 aaKnown RBP3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 ADAM20O43506 726 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 DANCRP0C864 163 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 MAPK12P53778 367 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 PAX9P55771 341 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 DSCR10P59022 87 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 BAATQ14032 418 aaPredicted RBP3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 UGT3A2Q3SY77 523 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 FASTKD1Q53R41 847 aaKnown RBP3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 SPATA1Q5VX52 437 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 DNAAF5Q86Y56 855 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 LSMEM2Q8N112 164 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 BMPERQ8N8U9 685 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 OR10S1Q8NGN2 331 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 SECISBP2LQ93073 1101 aaKnown RBP3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 SLAMF9Q96A28 289 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 C10orf90Q96M02 699 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 ZNF830Q96NB3 372 aaPredicted RBP3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 MIS12Q9H081 205 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 SPHK2Q9NRA0 654 aa3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 FAM207AQ9NSI2 230 aaPredicted RBP3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 PRMT7Q9NVM4 692 aaPredicted RBP3.87□□□□□ -1.79
RNU4-28P-201ENST00000364739 A0A1W2PPM1 405 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 MEX3AA1L020 520 aaKnown RBP3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 GLOD5A6NK44 160 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 NXPH2O95156 264 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 HAPLN1P10915 354 aaPredicted RBP3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 CYP2A7P20853 494 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 MMP12P39900 470 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 GSDMDP57764 484 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 LMO4P61968 165 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 CTU2Q2VPK5 515 aaKnown RBP3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 HLA-BQ31612 363 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 BSPRYQ5W0U4 402 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 C11orf63Q6NUN7 778 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 SLC25A47Q6Q0C1 308 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 SYT2Q8N9I0 419 aaPredicted RBP3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 GPRC5AQ8NFJ5 357 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 OR13C3Q8NGS6 347 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 TEKT4Q8WW24 435 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 OMA1Q96E52 524 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 CCDC106Q9BWC9 280 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 CCDC68Q9H2F9 335 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 RPS10P5Q9NQ39 176 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 OLAHQ9NV23 265 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 SPHK1Q9NYA1 384 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 PPIEQ9UNP9 301 aaKnown RBP3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 NME7Q9Y5B8 376 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 SMAD5-AS1Q9Y6J3 95 aa3.86□□□□□ -1.79
RNU4-28P-201ENST00000364739 A0A1B0GVY2 172 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 hCG_1809904A0A1W2PP81 198 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 A0A1W2PPE2 198 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 A0A1W2PR64 198 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 NEMP2A6NFY4 417 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 C2orf81A6NN90 581 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 FPGTO14772 594 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 ERAL1O75616 437 aaKnown RBP3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 IGHV2-70P01814 119 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 ZNF10P21506 573 aaPredicted RBP3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 CSTF2P33240 577 aaKnown RBP eCLIP3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 CCR10P46092 362 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 HSPB3Q12988 150 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 VEZF1Q14119 521 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 TNIP1Q15025 636 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 MFSD12Q6NUT3 480 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 FAAP20Q6NZ36 180 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 MMD2Q8IY49 270 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 LGI2Q8N0V4 545 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 RBM4BQ9BQ04 359 aaKnown RBP3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 PYGO2Q9BRQ0 406 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 THAP2Q9H0W7 228 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 UPF3AQ9H1J1 476 aaKnown RBP3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 PPANQ9NQ55 473 aaKnown RBP3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 MAN2C1Q9NTJ4 1040 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 OR6C2Q9NZP2 312 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 CPSF2Q9P2I0 782 aaKnown RBP3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 CHORDC1Q9UHD1 332 aaPredicted RBP3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 GRID1Q9ULK0 1009 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 ABT1Q9ULW3 272 aaKnown RBP3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 SNX8Q9Y5X2 465 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 KAT6BQ8WYB5 2073 aa3.85□□□□□ -1.79
RNU4-28P-201ENST00000364739 A0A1W2PR80 420 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 EPHB6O15197 1021 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 SPRY1O43609 319 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms