RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PCYT1BQ9Y5K3 369 aaPredicted RBP12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 TMEM202A6NGA9 273 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 AZIN1O14977 448 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 ANGPT2O15123 496 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 MTHFD2P13995 350 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 ZNF23P17027 643 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 MAT2AP31153 395 aaKnown RBP12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 TPMTP51580 245 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 DGKEP52429 567 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 STARD6P59095 220 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 TUBA4AP68366 448 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 RPS6KA2Q15349 733 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 TGFBIQ15582 683 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 UGT3A2Q3SY77 523 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 HEATR4Q86WZ0 1026 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 HORMAD1Q86X24 394 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 CARM1Q86X55 608 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 TRAPPC5Q8IUR0 188 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 PGBD3Q8N328 593 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 MINDY1Q8N5J2 469 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 HM13Q8TCT9 377 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 TMEM159Q96B96 161 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 LGR4Q9BXB1 951 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 C1QTNF2Q9BXJ5 285 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 SLC17A9Q9BYT1 436 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 TRIM54Q9BYV2 358 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 NOL11Q9H8H0 719 aaKnown RBP12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 CD320Q9NPF0 282 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 TIMMDC1Q9NPL8 285 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 WNT16Q9UBV4 365 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 AK5Q9Y6K8 562 aa12.82□□□□□ -0.36
SQSTM1-201ENST00000360718 ATP6AP2A0A1C7CYW4 349 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 NCF1BA6NI72 391 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 NCF1CA8MVU1 366 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 STX16O14662 325 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 AKAP10O43572 662 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 NUAK1O60285 661 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 ATP6AP2O75787 350 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 NCF1P14598 390 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 MTX3Q5HYI7 312 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 C6orf10Q5SRN2 563 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 NEK10Q6ZWH5 1172 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 ERMP1Q7Z2K6 904 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 VRK3Q8IV63 474 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 TP53I13Q8NBR0 393 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 MID1IP1Q9NPA3 183 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 C8orf4Q9NR00 106 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 CCM2LQ9NUG4 571 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 RNF11Q9Y3C5 154 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 OARD1Q9Y530 152 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 KANSL1LA0AUZ9 987 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 FAM170BA6NMN3 283 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 H3BNH8 94 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 NR5A2O00482 541 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 C8GP07360 202 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 GSTM1P09488 218 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 MPC1LP0DKB6 136 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 LBPP18428 481 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 TEAD1P28347 426 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 GRIA3P42263 894 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 SH3BP2P78314 561 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 GSTM4Q03013 218 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 FOXM1Q08050 763 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 IRF4Q15306 451 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 BCL7AQ4VC05 210 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 COQ5Q5HYK3 327 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 SBSNQ6UWP8 590 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 ISLR2Q6UXK2 745 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 AMIGO2Q86SJ2 522 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 FUNDC1Q8IVP5 155 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 LILRA3Q8N6C8 439 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 OR9I1Q8NGQ6 314 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 TSPEARQ8WU66 669 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 RMND5BQ96G75 393 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 NELL2Q99435 816 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 CIB1Q99828 191 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 GPATCH1Q9BRR8 931 aaKnown RBP12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 ANKRD60Q9BZ19 345 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 BTBD1Q9H0C5 482 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 WDR26Q9H7D7 661 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 CAAP1Q9H8G2 361 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 FZD3Q9NPG1 666 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 PFDN4Q9NQP4 134 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 PHPT1Q9NRX4 125 aaPredicted RBP12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 GULP1Q9UBP9 304 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 FAM8A1Q9UBU6 413 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 GPR34Q9UPC5 381 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 DNAJC15Q9Y5T4 150 aa12.81□□□□□ -0.36
SQSTM1-201ENST00000360718 USP34Q70CQ2 3546 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 DYTNA2CJ06 578 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 LRRC72A6NJI9 287 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 ZNF839A8K0R7 811 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 CHURC1-FNTBB4DL54 471 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 FFAR2O15552 330 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 KLK8O60259 260 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 LILRB5O75023 590 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 MATN4O95460 622 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 HSD17B1P14061 328 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 TSPAN8P19075 237 aa12.8□□□□□ -0.36
SQSTM1-201ENST00000360718 HK3P52790 923 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms