RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 MRPS26Q9BYN8 205 aaKnown RBP7.18□□□□□ -1.26
CLCN3-202ENST00000360642 TRIM4Q9C037 500 aa7.18□□□□□ -1.26
CLCN3-202ENST00000360642 SEMA6AQ9H2E6 1030 aa7.18□□□□□ -1.26
CLCN3-202ENST00000360642 PRSS50Q9UI38 385 aa7.18□□□□□ -1.26
CLCN3-202ENST00000360642 ZNF225Q9UK10 706 aa7.18□□□□□ -1.26
CLCN3-202ENST00000360642 PCDHB7Q9Y5E2 793 aa7.18□□□□□ -1.26
CLCN3-202ENST00000360642 ILVBLA1L0T0 632 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 H7C4K7 107 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CDC7O00311 574 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CLDN11O75508 207 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 OR6B1O95007 311 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 GJB5O95377 273 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CLPTM1O96005 669 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 KLKB1P03952 638 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 FAM58BPP0C7Q3 252 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 LINC00032P0C843 101 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 STAT5AP42229 794 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 SGSHP51688 502 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 ERVFC1P60507 584 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 RPS24P62847 133 aaKnown RBP7.17□□□□□ -1.26
CLCN3-202ENST00000360642 YBX1P67809 324 aaKnown RBP7.17□□□□□ -1.26
CLCN3-202ENST00000360642 GRIK2Q13002 908 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 TSNQ15631 228 aaKnown RBP7.17□□□□□ -1.26
CLCN3-202ENST00000360642 KIF19Q2TAC6 998 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 FAM180BQ6P0A1 224 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 PRMT9Q6P2P2 845 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CYP2R1Q6VVX0 501 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 PIANPQ8IYJ0 282 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 ABI1Q8IZP0 508 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 FBXO39Q8N4B4 442 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 ANKFN1Q8N957 763 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 OR2T34Q8NGX1 318 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 OR2T3Q8NH03 318 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 GAB3Q8WWW8 586 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 DGCR14Q96DF8 476 aaKnown RBP7.17□□□□□ -1.26
CLCN3-202ENST00000360642 SMIM14Q96QK8 99 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 GPR21Q99679 349 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 SLC29A1Q99808 456 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 SH3GL3Q99963 347 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CWH43Q9H720 699 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CNOT6Q9ULM6 557 aaKnown RBP7.17□□□□□ -1.26
CLCN3-202ENST00000360642 PADI4Q9UM07 663 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 RUVBL1Q9Y265 456 aaKnown RBP7.17□□□□□ -1.26
CLCN3-202ENST00000360642 ZNF840PA6NDX5 716 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 C2orf81A6NN90 581 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 SYCE1LA8MT33 242 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 SUPT3HB4E1H0 165 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 NR5A2O00482 541 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 VILLO15195 856 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 SUPT3HO75486 399 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 NDUFS3O75489 264 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CSPG5O95196 566 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CD160O95971 181 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CEACAM5P06731 702 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 GALTP07902 379 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 HSPA8P11142 646 aaKnown RBP7.17□□□□□ -1.26
CLCN3-202ENST00000360642 HGFP14210 728 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 IDO1P14902 403 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 ATP6V1B2P21281 511 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 SLC6A2P23975 617 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 SLC11A2P49281 568 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 ELAVL2Q12926 359 aaKnown RBP7.17□□□□□ -1.26
CLCN3-202ENST00000360642 NRF1Q16656 503 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 SPATS1Q496A3 300 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 XKR7Q5GH72 579 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 MTX3Q5HYI7 312 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CTSL3PQ5NE16 218 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 ANKS6Q68DC2 871 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CHST9Q7L1S5 443 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 LRRC8DQ7L1W4 858 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CARM1Q86X55 608 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 DDIASQ8IXT1 998 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 NUP43Q8NFH3 380 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 OVCA2Q8WZ82 227 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 LRRC58Q96CX6 371 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 RMDN1Q96DB5 314 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 OSBPL11Q9BXB4 747 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 RBM38Q9H0Z9 239 aaKnown RBP7.17□□□□□ -1.26
CLCN3-202ENST00000360642 SEMA4BQ9NPR2 832 aaPredicted RBP7.17□□□□□ -1.26
CLCN3-202ENST00000360642 SEMA3GQ9NS98 782 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 CMTM6Q9NX76 183 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 PCTPQ9UKL6 214 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 RNF11Q9Y3C5 154 aa7.17□□□□□ -1.26
CLCN3-202ENST00000360642 A0A1W2PQ45 241 aaPredicted RBP7.16□□□□□ -1.26
CLCN3-202ENST00000360642 A0A1W2PQY0 241 aa7.16□□□□□ -1.26
CLCN3-202ENST00000360642 ANKRD66B4E2M5 251 aa7.16□□□□□ -1.26
CLCN3-202ENST00000360642 H7C0S8 307 aa7.16□□□□□ -1.26
CLCN3-202ENST00000360642 ADAM12O43184 909 aa7.16□□□□□ -1.26
CLCN3-202ENST00000360642 ESRRBO95718 433 aa7.16□□□□□ -1.26
CLCN3-202ENST00000360642 PRKCAP17252 672 aa7.16□□□□□ -1.26
CLCN3-202ENST00000360642 PRDX3P30048 256 aaKnown RBP7.16□□□□□ -1.26
CLCN3-202ENST00000360642 CLCN4P51793 760 aa7.16□□□□□ -1.26
CLCN3-202ENST00000360642 HK3P52790 923 aa7.16□□□□□ -1.26
CLCN3-202ENST00000360642 ADARP55265 1226 aaKnown RBP7.16□□□□□ -1.26
CLCN3-202ENST00000360642 NME5P56597 212 aa7.16□□□□□ -1.26
CLCN3-202ENST00000360642 MVKQ03426 396 aa7.16□□□□□ -1.26
CLCN3-202ENST00000360642 FOXM1Q08050 763 aa7.16□□□□□ -1.26
CLCN3-202ENST00000360642 FAPQ12884 760 aa7.16□□□□□ -1.26
CLCN3-202ENST00000360642 PABPC1LQ4VXU2 614 aaKnown RBP7.16□□□□□ -1.26
CLCN3-202ENST00000360642 SLC8B1Q6J4K2 584 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms