RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 WDR1O75083 606 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 CYP1A2P05177 515 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 SLC35G4P0C7Q5 338 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 ITGAMP11215 1152 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 EFNA3P52797 238 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 EEF1A1P68104 462 aaKnown RBP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 EEF1A2Q05639 463 aaKnown RBP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 ITIH4Q14624 930 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 OCLNQ16625 522 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 EEF1A1P5Q5VTE0 462 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 FAAH2Q6GMR7 532 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 HEPHL1Q6MZM0 1159 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 UNC5AQ6ZN44 842 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 MCATQ8IVS2 390 aaKnown RBP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 FAM98AQ8NCA5 519 aaKnown RBP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 FBXO15Q8NCQ5 510 aaPredicted RBP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 CCDC110Q8TBZ0 833 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 VAT1Q99536 393 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 DHX35Q9H5Z1 703 aaKnown RBP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 NT5MQ9NPB1 228 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 QPCTLQ9NXS2 382 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 CDC14AQ9UNH5 594 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 SPO11Q9Y5K1 396 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 NIPBLQ6KC79 2804 aaeCLIP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 NSG1A0A0A6YYJ2 146 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 HCN1O60741 890 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 FERP16591 822 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 NSG1P42857 185 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 KLC1Q07866 573 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 TAF1AQ15573 450 aaPredicted RBP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 SLC13A5Q86YT5 568 aaPredicted RBP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 SLC22A15Q8IZD6 547 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 CA5BP1Q8WTZ4 195 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 RND1Q92730 232 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 RNASE6Q93091 150 aaKnown RBP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 C12orf66Q96MD2 445 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 PPP1R2P1Q96PQ5 205 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 SMIM14Q96QK8 99 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 NDNQ99608 321 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 FAM129AQ9BZQ8 928 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 SPATA7Q9P0W8 599 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 ADGRE2Q9UHX3 823 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 VPS13CQ709C8 3753 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 NOTCH2Q04721 2471 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 A0A0U1RQJ8 604 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 MFSD11O43934 449 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 CCDC172P0C7W6 258 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 RAB28P51157 221 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZNF140P52738 457 aaPredicted RBP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 LONRF2Q1L5Z9 754 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 HGSNATQ68CP4 663 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 RTL6Q6ICC9 239 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 SLC25A25Q6KCM7 469 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 TMEM220Q6QAJ8 160 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 NETO2Q8NC67 525 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 LPCAT1Q8NF37 534 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 STT3BQ8TCJ2 826 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 NUDT8Q8WV74 236 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 TMEM158Q8WZ71 300 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 THAP11Q96EK4 314 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 UGT1A7Q9HAW7 530 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZNF304Q9HCX3 659 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 MRPL47Q9HD33 250 aaKnown RBP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 SH2D2AQ9NP31 389 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 TXLNGQ9NUQ3 528 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 SOHLH2Q9NX45 425 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 LIMA1Q9UHB6 759 aaKnown RBP5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 TEKT2Q9UIF3 430 aa5.66□□□□□ -1.5
CDC42SE2-201ENST00000360515 GLYATL1P3A0A0U1RQE8 302 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 TTC24A2A3L6 582 aaPredicted RBP5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 TULP1O00294 542 aaPredicted RBP5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 TXNDC9O14530 226 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 RASGRF2O14827 1237 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 NADKO95544 446 aaPredicted RBP5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 RARAP10276 462 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 ESRRAP11474 423 aaPredicted RBP5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 LOXP28300 417 aaPredicted RBP5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 ASCL1P50553 236 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 HLCSP50747 726 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 NUP107P57740 925 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 SRSF11Q05519 484 aaKnown RBP5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 MPP3Q13368 585 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 TDRD12Q587J7 1177 aaKnown RBP5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 CMPK2Q5EBM0 449 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 NHSL2Q5HYW2 709 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 FAM69BQ5VUD6 431 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 PODNL1Q6PEZ8 512 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 CRTC3Q6UUV7 619 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 APTXQ7Z2E3 356 aaKnown RBP5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 LCN9Q8WX39 176 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 PPM1MQ96MI6 270 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZNF160Q9HCG1 818 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 RBM22Q9NW64 420 aaKnown RBP eCLIP5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZNF281Q9Y2X9 895 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 FAM169AQ9Y6X4 670 aa5.65□□□□□ -1.5
CDC42SE2-201ENST00000360515 CR1P17927 2039 aa5.65□□□□□ -1.51
CDC42SE2-201ENST00000360515 ANKHD1Q8IWZ3 2542 aaKnown RBP5.65□□□□□ -1.51
CDC42SE2-201ENST00000360515 A8MX80 341 aa5.65□□□□□ -1.51
CDC42SE2-201ENST00000360515 WFS1O76024 890 aa5.65□□□□□ -1.51
CDC42SE2-201ENST00000360515 RNF8O76064 485 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms