RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CDKN2CP42773 168 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 CRISP1P54107 249 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 AADACL2Q6P093 401 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 ADAM7Q9H2U9 754 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 AIPO00170 330 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 TSPAN15O95858 294 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 IFNGR1P15260 489 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 MAGEA11P43364 429 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 SPIN4Q56A73 249 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 STRADAQ7RTN6 431 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 AUTS2Q8WXX7 1259 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 POTEKPQ9BYX7 375 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 SPATC1LQ9H0A9 340 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 LOC100130705A0A1B0GUX0 176 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 HTR3EA5X5Y0 456 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 SLITRK5O94991 958 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 RAB4AP20338 218 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 ENPP2Q13822 863 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 PLA2G4EQ3MJ16 856 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 AARDQ4LEZ3 155 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 ABHD13Q7L211 337 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 CIDECQ96AQ7 238 aaPredicted RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 FBXW2Q9UKT8 454 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 MAGI3Q5TCQ9 1506 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 MINDY4Q4G0A6 757 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 FBXO33Q7Z6M2 555 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 NR4A3Q92570 626 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 RAB11FIP5Q9BXF6 653 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 COPZ2Q9P299 210 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 PCYT1BQ9Y5K3 369 aaPredicted RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 PQBP1O60828 265 aaKnown RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 CLDN11O75508 207 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 HRGP04196 525 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 CTPS1P17812 591 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 GALNT13Q8IUC8 556 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 GAL3ST1Q99999 423 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 KIAA1522Q9P206 1035 aaPredicted RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 GNG13Q9P2W3 67 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 FETUBQ9UGM5 382 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF175Q9Y473 711 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 RBMXP38159 391 aaKnown RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 NFIXQ14938 502 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 NPTX1Q15818 432 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 LY6KQ17RY6 165 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 ADGRD1Q6QNK2 874 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF34Q8IZ26 560 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 SMG8Q8ND04 991 aaKnown RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 GTF2IRD1Q9UHL9 959 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 PTCH2Q9Y6C5 1203 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 BMP8BP34820 402 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 ALDH3B2P48448 385 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 MOGQ16653 247 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 BMP8AQ7Z5Y6 402 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 PKMP14618 531 aaKnown RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 ARL13AQ5H913 290 aaPredicted RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 P2RY11Q96G91 374 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 EPYCQ99645 322 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 WDR55Q9H6Y2 383 aaPredicted RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 P2RX2Q9UBL9 471 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 GNG8Q9UK08 70 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 HCN2Q9UL51 889 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 LRRC42Q9Y546 428 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 PPLO60437 1756 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 E7EQ34 232 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF670-ZNF695F2Z2N8 137 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 IFNA5P01569 189 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 LUMP51884 338 aaPredicted RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.11□□□□□ -0.953e-6■■■□□ 15.4
VPS13A-203ENST00000360280 PPP1R26Q5T8A7 1209 aaPredicted RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 C12orf50Q8NA57 414 aaPredicted RBP9.11□□□□□ -0.95
VPS13A-203ENST00000360280 OR7D4Q8NG98 312 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 ELMO3Q96BJ8 720 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 MALSU1Q96EH3 234 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 TVP23BQ9NYZ1 205 aa9.11□□□□□ -0.95
VPS13A-203ENST00000360280 SETD1AO15047 1707 aaKnown RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 EME2A4GXA9 379 aaPredicted RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 GRIN3BO60391 1043 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 HDCP19113 662 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 CASRP41180 1078 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 LMLNQ96KR4 655 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 JSRP1Q96MG2 331 aaPredicted RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 PRDM12Q9H4Q4 367 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 ERCC6L2Q5T890 1561 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 ZBTB7AO95365 584 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 TBRG1Q3YBR2 411 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 TMEM214Q6NUQ4 689 aaKnown RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 TATDN1Q6P1N9 297 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 AZIN2Q96A70 460 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 AURKBQ96GD4 344 aaPredicted RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 RIPOR3Q96MK2 946 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 PDGFDQ9GZP0 370 aaPredicted RBP9.1□□□□□ -0.95
VPS13A-203ENST00000360280 GPR89AB7ZAQ6 455 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 SCDO00767 359 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 OR1F1O43749 312 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 PAGE1O75459 146 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 GPR89BP0CG08 455 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 NRIP1P48552 1158 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 GBE1Q04446 702 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 NFE2L1Q14494 772 aa9.1□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF404Q494X3 552 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms