RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 TUBB6Q9BUF5 446 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ZSCAN5AQ9BUG6 496 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 TIMMDC1Q9NPL8 285 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 MBNL1Q9NR56 388 aaKnown RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 INIPQ9NRY2 104 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 THAP10Q9P2Z0 257 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 OPTCQ9UBM4 332 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 KLQ9UEF7 1012 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 LIMD1Q9UGP4 676 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 PLAGL1Q9UM63 463 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 SLC22A14Q9Y267 594 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 CA5BQ9Y2D0 317 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 GPC6Q9Y625 555 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 CKAP5Q14008 2032 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ARPC4-TTLL3A0A0A6YYG9 625 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 NARSO43776 548 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 MAGEC1O60732 1142 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 PRAMEF4O60810 478 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 WDR47O94967 919 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 GSTT2P0CG29 244 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 GSTT2BP0CG30 244 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ZNF8P17098 575 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 RPL10P27635 214 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 GRIA2P42262 883 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 TMED10P49755 219 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 THOP1P52888 689 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 UFM1P61960 85 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 TRAP1Q12931 704 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 E2F2Q14209 437 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 FGL2Q14314 439 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 CST6Q15828 149 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 TTLL9Q3SXZ7 439 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 MMEL1Q495T6 779 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 XP32Q5T750 250 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 AGBL4Q5VU57 503 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 PRAMEF9Q5VWM5 478 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 METTL21CQ5VZV1 264 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 OR52E8Q6IFG1 317 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ANO7Q6IWH7 933 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 NEK5Q6P3R8 708 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 TMEM154Q6P9G4 183 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 TMEM184AQ6ZMB5 413 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 FAM83HQ6ZRV2 1179 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 Q6ZSR9 355 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 DGLUCYQ7Z3D6 616 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 MILR1Q7Z6M3 343 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ADGRG6Q86SQ4 1221 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 RETREG3Q86VR2 466 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 HEATR4Q86WZ0 1026 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ZNF547Q8IVP9 402 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 SFRP1Q8N474 314 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 AFAP1L2Q8N4X5 818 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 CPSF7Q8N684 471 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 FRMD1Q8N878 549 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 FNDC5Q8NAU1 212 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 GALNT6Q8NCL4 622 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 PDPRQ8NCN5 879 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 DDHD1Q8NEL9 900 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 TMIEQ8NEW7 156 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ACTRT2Q8TDY3 377 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 CXorf40AQ8TE69 158 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 UCMAQ8WVF2 138 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ASB11Q8WXH4 323 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ELSPBP1Q96BH3 223 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 PDLIM5Q96HC4 596 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 VPS50Q96JG6 964 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 CENPKQ9BS16 269 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 CD244Q9BZW8 370 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 KLHL4Q9C0H6 718 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 PIF1Q9H611 641 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 C12orf10Q9HB07 376 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 AASDHPPTQ9NRN7 309 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 FAIMQ9NVQ4 179 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 SLC23A2Q9UGH3 650 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 MTCH2Q9Y6C9 303 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 PCM1Q15154 2024 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 TDRD6O60522 2096 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 A0A0B4J203 849 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 A0A0J9YVX5 310 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ARHGAP10A1A4S6 786 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 C2CD4DB7Z1M9 353 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 CFAP99D6REC4 459 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 E7ENX8 843 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 SYNCRIPO60506 623 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 DNAJA2O60884 412 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 ADAM23O75077 832 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 SNRNP200O75643 2136 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 STK16O75716 305 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 RSL1D1O76021 490 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 KLF8O95600 359 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 BAG2O95816 211 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 B3GALT4O96024 378 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 LMNAP02545 664 aaKnown RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 S100A6P06703 90 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 FGF4P08620 206 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 UROSP10746 265 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 THRAP10827 490 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 XRCC1P18887 633 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-202ENST00000359366 CAPN3P20807 821 aa4.95□□□□□ -1.62
ATXN3-202ENST00000359366 GPX3P22352 226 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms