RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ATP5A1P25705 553 aaKnown RBP18■□□□□ 0.47
SHANK1-202ENST00000359082 PBX1P40424 430 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 CCNHP51946 323 aaPredicted RBP18■□□□□ 0.47
SHANK1-202ENST00000359082 SCGB2B2Q4G0G5 96 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 CARD16Q5EG05 197 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 PRPF38BQ5VTL8 546 aaKnown RBP18■□□□□ 0.47
SHANK1-202ENST00000359082 METTL21CQ5VZV1 264 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 OR2L8Q8NGY9 312 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 NUSAP1Q9BXS6 441 aaKnown RBP18■□□□□ 0.47
SHANK1-202ENST00000359082 METTL8Q9H825 291 aaKnown RBP18■□□□□ 0.47
SHANK1-202ENST00000359082 ZDHHC4Q9NPG8 344 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 DNAJB9Q9UBS3 223 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 FAM234BA2RU67 622 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 TBX1O43435 398 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 RPP14O95059 124 aaKnown RBP18■□□□□ 0.47
SHANK1-202ENST00000359082 IFI30P13284 250 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 MPIP34949 423 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 AMZ2Q86W34 360 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 SLC30A8Q8IWU4 369 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 MPP5Q8N3R9 675 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 OR10G2Q8NGC3 310 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 OR13C4Q8NGS5 318 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 NKD2Q969F2 451 aaPredicted RBP18■□□□□ 0.47
SHANK1-202ENST00000359082 ADAP2Q9NPF8 381 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 PCDHGB7Q9Y5F8 929 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 PCDHGB5Q9Y5G0 923 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 MAFBQ9Y5Q3 323 aaPredicted RBP18■□□□□ 0.47
SHANK1-202ENST00000359082 SLC9A4Q6AI14 798 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 SDR16C5Q8N3Y7 309 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 PRICKLE1Q96MT3 831 aaPredicted RBP18■□□□□ 0.47
SHANK1-202ENST00000359082 PCDHGA10Q9Y5H3 936 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 PRORSD1PA6NEY8 169 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 PTGIRP43119 386 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 DAOAP59103 153 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 CCDC120Q96HB5 630 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 ADAD1Q96M93 576 aaKnown RBP17.99■□□□□ 0.47
SHANK1-202ENST00000359082 TMED9Q9BVK6 235 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 POLR2J2Q9GZM3 115 aaKnown RBP17.99■□□□□ 0.47
SHANK1-202ENST00000359082 MAU2Q9Y6X3 613 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 C2CD4BA6NLJ0 364 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 PPIGQ13427 754 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHANK1-202ENST00000359082 RUNDC3AQ59EK9 446 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 GALNT15Q8N3T1 639 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 PHC3Q8NDX5 983 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 NXPE2Q96DL1 559 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 CENPMQ9NSP4 180 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 FZD4Q9ULV1 537 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 WASF2Q9Y6W5 498 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 NDUFS4O43181 175 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 KDM4BO94953 1096 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 ALPIP09923 528 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 CDKN1CP49918 316 aaPredicted RBP17.99■□□□□ 0.47
SHANK1-202ENST00000359082 C1orf189Q5VU69 101 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 GDF6Q6KF10 455 aaPredicted RBP17.99■□□□□ 0.47
SHANK1-202ENST00000359082 OXR1Q8N573 874 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 ANKHQ9HCJ1 492 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 TMEM150CB9EJG8 249 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 ASPAP45381 313 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 OR2B6P58173 313 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 LILRA4P59901 499 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 HYAL2Q12891 473 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 COLEC12Q5KU26 742 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 CEP97Q8IW35 865 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 EZH1Q92800 747 aaPredicted RBP17.99■□□□□ 0.47
SHANK1-202ENST00000359082 TAMM41Q96BW9 452 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 PCDHAC1Q9H158 963 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 RC3H2Q9HBD1 1191 aaKnown RBP17.99■□□□□ 0.47
SHANK1-202ENST00000359082 LGALS13Q9UHV8 139 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 RPL36Q9Y3U8 105 aaKnown RBP17.99■□□□□ 0.47
SHANK1-202ENST00000359082 CLDN25C9JDP6 229 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 ZNF878C9JN71 531 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 ZNF676Q8N7Q3 588 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 AASSQ9UDR5 926 aa17.99■□□□□ 0.47
SHANK1-202ENST00000359082 TMEM88BA6NKF7 163 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 ACRP10323 421 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 ACP5P13686 325 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 GNAZP19086 355 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 TAS2R50P59544 299 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 SLBPQ14493 270 aaKnown RBP eCLIP17.98■□□□□ 0.47
SHANK1-202ENST00000359082 FAM110CQ1W6H9 321 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 FOXRED2Q8IWF2 684 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 C7orf57Q8NEG2 295 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 SCAMP5Q8TAC9 235 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 POLR2J3Q9H1A7 115 aaKnown RBP17.98■□□□□ 0.47
SHANK1-202ENST00000359082 ANKRA2Q9H9E1 313 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 HPF1Q9NWY4 346 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 KANTRA0A1W2PQU2 76 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 AKAP8O43823 692 aaKnown RBP17.98■□□□□ 0.47
SHANK1-202ENST00000359082 CHRNB2P17787 502 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 SLC7A1P30825 629 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 TBL1XR1Q9BZK7 514 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 K7EPI3 171 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 C8AP07357 584 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 EIF1AXP47813 144 aaKnown RBP17.98■□□□□ 0.47
SHANK1-202ENST00000359082 ARFRP1Q13795 201 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 EIF2S3LQ2VIR3 472 aaKnown RBP17.98■□□□□ 0.47
SHANK1-202ENST00000359082 CRB2Q5IJ48 1285 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 ZNF527Q8NB42 609 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 TESCQ96BS2 214 aa17.98■□□□□ 0.47
SHANK1-202ENST00000359082 PLCZ1Q86YW0 608 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms