RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TOR3AQ9H497 397 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 NANOGQ9H9S0 305 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 ARFGEF2Q9Y6D5 1785 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 DCLK1O15075 740 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 C8AP07357 584 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 ITPKBP27987 946 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 PSMD8P48556 350 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 PNLIPRP1P54315 467 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 RAB15P59190 212 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 ADAM17P78536 824 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 GRB7Q14451 532 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 SUZ12Q15022 739 aaKnown RBP13.41□□□□□ -0.26
VCP-201ENST00000358901 TECRLQ5HYJ1 363 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 AGMOQ6ZNB7 445 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 OR5AK3PQ8NH89 298 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 ING5Q8WYH8 240 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 MUS81Q96NY9 551 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 S100A13Q99584 98 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 OR2AG1Q9H205 316 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 COMMD9Q9P000 198 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 GPC6Q9Y625 555 aaPredicted RBP13.41□□□□□ -0.26
VCP-201ENST00000358901 IQCMA0A1B0GVH7 501 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 M0QX08 132 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 ABHD18Q0P651 414 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 SLBPQ14493 270 aaKnown RBP eCLIP13.41□□□□□ -0.26
VCP-201ENST00000358901 TAF13Q15543 124 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 UBXN11Q5T124 520 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 MEIOBQ8N635 442 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 C2orf15Q8WU43 125 aaKnown RBP13.41□□□□□ -0.26
VCP-201ENST00000358901 DMRTB1Q96MA1 342 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 COL21A1Q96P44 957 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 DNAAF2Q9NVR5 837 aaKnown RBP13.41□□□□□ -0.26
VCP-201ENST00000358901 COMMD3Q9UBI1 195 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 IKZF2Q9UKS7 526 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 MRPS33Q9Y291 106 aaKnown RBP13.41□□□□□ -0.26
VCP-201ENST00000358901 IRAK3Q9Y616 596 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 FABP12A6NFH5 140 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 TLL1O43897 1013 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 DNTTP04053 509 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 EMX2Q04743 252 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 SCLYQ96I15 445 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 CITO14578 2027 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 CCNDBP1O95273 360 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 SNAP29O95721 258 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 EPOP01588 193 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 RLN1P04808 185 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 PABPC4LP0CB38 370 aaKnown RBP13.41□□□□□ -0.26
VCP-201ENST00000358901 NT5EP21589 574 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 AP1S2P56377 157 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 PRKCZQ05513 592 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 PSRC1Q6PGN9 363 aaPredicted RBP13.41□□□□□ -0.26
VCP-201ENST00000358901 SMARCD3Q6STE5 483 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 SMG7Q92540 1137 aaKnown RBP13.41□□□□□ -0.26
VCP-201ENST00000358901 ZUFSPQ96AP4 578 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 ZBED6CLQ96FA7 236 aaPredicted RBP13.41□□□□□ -0.26
VCP-201ENST00000358901 AURKBQ96GD4 344 aaPredicted RBP13.41□□□□□ -0.26
VCP-201ENST00000358901 PKP4Q99569 1192 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 PDCD10Q9BUL8 212 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 TMEM27Q9HBJ8 222 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 RNF11Q9Y3C5 154 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 MYH7BA7E2Y1 1941 aa13.41□□□□□ -0.26
VCP-201ENST00000358901 A0A0D9SEW6 157 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 A0A1W2PRU2 124 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 CLDN10P78369 228 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 PRR5P85299 388 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 SCARB2Q14108 478 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 PTGR1Q14914 329 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 USP43Q70EL4 1123 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 C16orf70Q9BSU1 422 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 LRRC14BA6NHZ5 514 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 ARVCFO00192 962 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 PRAMEF11O60813 436 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 SLC25A12O75746 678 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 SNAI1O95863 264 aaPredicted RBP13.4□□□□□ -0.26
VCP-201ENST00000358901 OAS1P00973 400 aaKnown RBP13.4□□□□□ -0.26
VCP-201ENST00000358901 PCCBP05166 539 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 GJA1P17302 382 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 ETV4P43268 484 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 CLCN4P51793 760 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 MYBPC1Q00872 1141 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 CADM2Q8N3J6 435 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 OR2AP1Q8NGE2 309 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 PIGXQ8TBF5 258 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 RFKQ969G6 155 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 RACGAP1Q9H0H5 632 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 OR51V1Q9H2C8 321 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 CFL2Q9Y281 166 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 PTGDR2Q9Y5Y4 395 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.4□□□□□ -0.26
VCP-201ENST00000358901 MANBAO00462 879 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 HAPLN1P10915 354 aaPredicted RBP13.4□□□□□ -0.26
VCP-201ENST00000358901 ZNF829Q3KNS6 432 aaPredicted RBP13.4□□□□□ -0.26
VCP-201ENST00000358901 CRB2Q5IJ48 1285 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 NEK5Q6P3R8 708 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 B3GNT9Q6UX72 402 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 PRR23BQ6ZRT6 265 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 TMEM126BQ8IUX1 230 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 SLC15A3Q8IY34 581 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 RGL4Q8IZJ4 473 aa13.4□□□□□ -0.26
VCP-201ENST00000358901 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.4□□□□□ -0.269e-6■■■□□ 15.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms