RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 EBF3Q9H4W6 596 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 DECR2Q9NUI1 292 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 PDP1Q9P0J1 537 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 RAI2Q9Y5P3 530 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 B3GALT1Q9Y5Z6 326 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TLL2Q9Y6L7 1015 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 RAB27BO00194 218 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 SHOX2O60902 331 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 ANXA4P09525 319 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 NELFEP18615 380 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CCND1P24385 295 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 GP5P40197 560 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 GRM3Q14832 879 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 NNATQ16517 81 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 PCID2Q5JVF3 399 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 FAM92BQ6ZTR7 304 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 DNAJB7Q7Z6W7 309 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CLEC1AQ8NC01 280 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF566Q969W8 418 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 ACDQ96AP0 544 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 BSCL2Q96G97 398 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TBCBQ99426 244 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 MAP3K14Q99558 947 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TREX2Q9BQ50 279 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 KAT8Q9H7Z6 458 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 PCYOX1Q9UHG3 505 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 SLC7A11Q9UPY5 501 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 AP4B1Q9Y6B7 739 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CNTNAP1P78357 1384 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PRAMEF33A0A0G2JMD5 474 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 SLC38A8A6NNN8 435 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 SLC1A7O00341 560 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PIP5K1BO14986 540 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 SNAP91O60641 907 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PRAMEF10O60809 474 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 LATS1O95835 1130 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 BMP4P12644 408 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ITIH1P19827 911 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 AIMP2Q13155 320 aaKnown RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 GRIK5Q16478 980 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 CELF3Q5SZQ8 465 aaKnown RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 C17orf50Q8WW18 174 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PLEKHG4BQ96PX9 1271 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 DEFB126Q9BYW3 111 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 TRPV5Q9NQA5 729 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 MAN2C1Q9NTJ4 1040 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 MTMR10Q9NXD2 777 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 NOP16Q9Y3C1 178 aaKnown RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 UNC13BO14795 1591 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PZPP20742 1482 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 UGGT1Q9NYU2 1555 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 SLC15A5A6NIM6 579 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 HAX1O00165 279 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 CRHBPP24387 322 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 POU3F4P49335 361 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PSMD7P51665 324 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 OAZ1P54368 228 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 VSX2P58304 361 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 C9orf135Q5VTT2 229 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF598Q86UK7 904 aaKnown RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 OR2T27Q8NH04 317 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ACTL9Q8TC94 416 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 LIN37Q96GY3 246 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 TMEM74Q96NL1 305 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 DENND2DQ9H6A0 471 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 GRHPRQ9UBQ7 328 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 GNG8Q9UK08 70 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 MED16Q9Y2X0 877 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 INO80Q9ULG1 1556 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 DDTLA6NHG4 134 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 CHEK1O14757 476 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 RNGTTO60942 597 aaKnown RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 SPARCP09486 303 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 DHRS4L1P0CG22 281 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 HLA-EP13747 358 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PFKLP17858 780 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 PON1P27169 355 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 TTKP33981 857 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 GNG2P59768 71 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 OGDHQ02218 1023 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 MFSD13AQ14CX5 517 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 DLG2Q15700 870 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 TRIM61Q5EBN2 209 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 RBM48Q5RL73 367 aaKnown RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 FAM180BQ6P0A1 224 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 DPY19L3Q6ZPD9 716 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 MCATQ8IVS2 390 aaKnown RBP5.68□□□□□ -1.5
BRCA1-203ENST00000357654 OR4D6Q8NGJ1 314 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 SH3RF2Q8TEC5 729 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 C22orf15Q8WYQ4 148 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 AZIN2Q96A70 460 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ZSWIM1Q9BR11 485 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ARNT2Q9HBZ2 717 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ASB6Q9NWX5 421 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 KCNIP1Q9NZI2 227 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 DNAJC27Q9NZQ0 273 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 LRIT1Q9P2V4 623 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 ADGRE2Q9UHX3 823 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 MAPRE3Q9UPY8 281 aa5.68□□□□□ -1.5
BRCA1-203ENST00000357654 MAFBQ9Y5Q3 323 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms