RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PIP4P1Q86T03 277 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 OR56A3Q8NH54 315 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 TMEM237Q96Q45 408 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 INTS7Q9NVH2 962 aaKnown RBP24.56■■□□□ 1.52
SSBP3-202ENST00000357475 LNPEPQ9UIQ6 1025 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 IGHV1OR21-1A0A087WYE8 117 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 CHRM5P08912 532 aaPredicted RBP24.56■■□□□ 1.52
SSBP3-202ENST00000357475 POLR2CP19387 275 aaPredicted RBP24.56■■□□□ 1.52
SSBP3-202ENST00000357475 TAC1P20366 129 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 SLC6A12P48065 614 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 SERPINB4P48594 390 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 FAM20CQ8IXL6 584 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 RDH11Q8TC12 318 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 OR4K3Q96R72 315 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 PAIP2Q9BPZ3 127 aaKnown RBP24.56■■□□□ 1.52
SSBP3-202ENST00000357475 CCDC3Q9BQI4 270 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.56■■□□□ 1.52
SSBP3-202ENST00000357475 TWSG1Q9GZX9 223 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 SH2B3Q9UQQ2 575 aa24.56■■□□□ 1.52
SSBP3-202ENST00000357475 CFAP54Q96N23 3096 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 IPO13O94829 963 aaKnown RBP24.55■■□□□ 1.52
SSBP3-202ENST00000357475 BPGMP07738 259 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 CKMT2P17540 419 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 EEF1DP29692 281 aaKnown RBP24.55■■□□□ 1.52
SSBP3-202ENST00000357475 GGT5P36269 586 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 HNMTP50135 292 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 PRKAA2P54646 552 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 NFKB2Q00653 900 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 CFHR1Q03591 330 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 ARHGAP19Q14CB8 494 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 AMZ1Q400G9 498 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 CDKL4Q5MAI5 379 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 HMGCLL1Q8TB92 370 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 RAB11FIP5Q9BXF6 653 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 PITPNM3Q9BZ71 974 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 OXSMQ9NWU1 459 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 NKIRAS1Q9NYS0 192 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 OR6C2Q9NZP2 312 aa24.55■■□□□ 1.52
SSBP3-202ENST00000357475 UNC13CQ8NB66 2214 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 PRICKLE3O43900 615 aaPredicted RBP24.54■■□□□ 1.52
SSBP3-202ENST00000357475 PROS1P07225 676 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 CD1CP29017 333 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 GPR3P46089 330 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 ATP1A2P50993 1020 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 LIMK1P53667 647 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 CES4AQ5XG92 561 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 TCAIMQ8N3R3 496 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 FLVCR1-AS1Q8TAF5 88 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 UBTD2Q8WUN7 234 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 ATL1Q8WXF7 558 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 PPM1MQ96MI6 270 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 NSUN5Q96P11 429 aaKnown RBP24.54■■□□□ 1.52
SSBP3-202ENST00000357475 ACAT2Q9BWD1 397 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 CD244Q9BZW8 370 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 HRASLS2Q9NWW9 162 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 SLC22A14Q9Y267 594 aa24.54■■□□□ 1.52
SSBP3-202ENST00000357475 OR5K3A6NET4 321 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 KDM1AO60341 852 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 CCNT2O60583 730 aaKnown RBP24.53■■□□□ 1.52
SSBP3-202ENST00000357475 WDR47O94967 919 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 CHN1P15882 459 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 PNLIPP16233 465 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 AMD1P17707 334 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 ACP1P24666 158 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 CSF2RBP32927 897 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 CCL7P80098 99 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 HHATQ5VTY9 493 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 ZCCHC23Q6ZST2 131 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 USP53Q70EK8 1073 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 RAB42Q8N4Z0 105 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 DEFB124Q8NES8 71 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 OR6C4Q8NGE1 309 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 NAT6Q93015 286 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 SGPP1Q9BX95 441 aa24.53■■□□□ 1.52
SSBP3-202ENST00000357475 A0A1W2PQM1 296 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 STX16-NPEPL1H3BU86 382 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 E2F3O00716 465 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 STX16O14662 325 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 HSD17B2P37059 387 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 CCR10P46092 362 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 CAPZBP47756 277 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 ACADVLP49748 655 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 DUSP3P51452 185 aaPredicted RBP24.52■■□□□ 1.52
SSBP3-202ENST00000357475 EPHA4P54764 986 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 UNC50Q53HI1 259 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 ZNF678Q5SXM1 525 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 FAM219BQ5XKK7 198 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 THOC6Q86W42 341 aaKnown RBP24.52■■□□□ 1.52
SSBP3-202ENST00000357475 KLHDC8AQ8IYD2 350 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 SMPDL3AQ92484 453 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 CCDC177Q9NQR7 707 aaPredicted RBP24.52■■□□□ 1.52
SSBP3-202ENST00000357475 ACTR10Q9NZ32 417 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 TAC3Q9UHF0 121 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 TMCO1Q9UM00 188 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 PCNX2A6NKB5 2137 aa24.52■■□□□ 1.52
SSBP3-202ENST00000357475 COL27A1Q8IZC6 1860 aaPredicted RBP24.51■■□□□ 1.51
SSBP3-202ENST00000357475 PIPSLA2A3N6 862 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 GSAPA4D1B5 854 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 FAM221BA6H8Z2 402 aa24.51■■□□□ 1.51
SSBP3-202ENST00000357475 STK16O75716 305 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms