RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 SCAMP3O14828 347 aaKnown RBP12.59□□□□□ -0.39
SMC4-202ENST00000357388 RNASEH2AO75792 299 aaKnown RBP12.59□□□□□ -0.39
SMC4-202ENST00000357388 UBXN7O94888 489 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 CYP3A5P20815 502 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 CPN2P22792 545 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 HADHBP55084 474 aaKnown RBP12.59□□□□□ -0.39
SMC4-202ENST00000357388 SSTP61278 116 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 VLDLRP98155 873 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 MC1RQ01726 317 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 HSDL1Q3SXM5 330 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 SH3D19Q5HYK7 790 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 PRAMEF19Q5SWL8 479 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 LRRN3Q9H3W5 708 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 ZNF358Q9NW07 568 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 ERVK-11Q9UQG0 969 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 TIMM22Q9Y584 194 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 SALL3Q9BXA9 1300 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 INMT-MINDY4F8WBC2 141 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 AGR2O95994 175 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 ALPPP05187 535 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 RPS2P15880 293 aaKnown RBP12.59□□□□□ -0.39
SMC4-202ENST00000357388 ITPKAP23677 461 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 BLKP51451 505 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 SMSP52788 366 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 S100A10P60903 97 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 E2F1Q01094 437 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 TBRG1Q3YBR2 411 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 PTPN20Q4JDL3 420 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 TATDN1Q6P1N9 297 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 ZNF572Q7Z3I7 529 aaPredicted RBP12.59□□□□□ -0.39
SMC4-202ENST00000357388 GEMIN6Q8WXD5 167 aaKnown RBP12.59□□□□□ -0.39
SMC4-202ENST00000357388 COPS5Q92905 334 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 LPPQ93052 612 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 MSANTD3Q96H12 275 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 ZNF641Q96N77 438 aaPredicted RBP12.59□□□□□ -0.39
SMC4-202ENST00000357388 MAFFQ9ULX9 164 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 CASZ1Q86V15 1759 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 C9IYK1 514 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 IFNA1P01562 189 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 MT-ND1P03886 318 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 HOXA10P31260 410 aaPredicted RBP12.59□□□□□ -0.39
SMC4-202ENST00000357388 ZNF81P51508 661 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 PRMT2P55345 433 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 GJA9P57773 515 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 MCCD1P59942 119 aaPredicted RBP12.59□□□□□ -0.39
SMC4-202ENST00000357388 TRAM1Q15629 374 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 CLEC6AQ6EIG7 209 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 SLAIN1Q8ND83 568 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 NDC1Q9BTX1 674 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 UNKLQ9H9P5 680 aaKnown RBP12.59□□□□□ -0.39
SMC4-202ENST00000357388 EQTNQ9NQ60 294 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 ZIM2Q9NZV7 527 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 TNFRSF10DQ9UBN6 386 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 SETBP1Q9Y6X0 1596 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 LOC100130705A0A1B0GUX0 176 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 CDK14O94921 469 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 GKN3PP0CG01 181 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 PSMD8P48556 350 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 SP2Q02086 613 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 SLC24A5Q71RS6 500 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 ZNF676Q8N7Q3 588 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 SUN3Q8TAQ9 357 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 S100A16Q96FQ6 103 aaKnown RBP12.59□□□□□ -0.39
SMC4-202ENST00000357388 CSPG4P5Q96PW8 444 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 MCCC2Q9HCC0 563 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 IL17RBQ9NRM6 502 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 COPS7AQ9UBW8 275 aa12.59□□□□□ -0.39
SMC4-202ENST00000357388 PIGBOS1A0A0B4J2F0 54 aa12.58□□□□□ -0.39
SMC4-202ENST00000357388 TMEM150BA6NC51 233 aa12.58□□□□□ -0.39
SMC4-202ENST00000357388 AGPSO00116 658 aa12.58□□□□□ -0.39
SMC4-202ENST00000357388 EPHX1P07099 455 aa12.58□□□□□ -0.39
SMC4-202ENST00000357388 FGL1Q08830 312 aa12.58□□□□□ -0.39
SMC4-202ENST00000357388 TSTQ16762 297 aaKnown RBP12.58□□□□□ -0.39
SMC4-202ENST00000357388 ZNF767PQ75MW2 155 aa12.58□□□□□ -0.39
SMC4-202ENST00000357388 SPATA22Q8NHS9 363 aa12.58□□□□□ -0.39
SMC4-202ENST00000357388 SLC7A6OSQ96CW6 309 aaPredicted RBP12.58□□□□□ -0.39
SMC4-202ENST00000357388 COQ8BQ96D53 544 aa12.58□□□□□ -0.39
SMC4-202ENST00000357388 ZBED6CLQ96FA7 236 aaPredicted RBP12.58□□□□□ -0.39
SMC4-202ENST00000357388 FCRL2Q96LA5 508 aaPredicted RBP12.58□□□□□ -0.39
SMC4-202ENST00000357388 RIMKLBQ9ULI2 386 aa12.58□□□□□ -0.39
SMC4-202ENST00000357388 EXOSC1Q9Y3B2 195 aaKnown RBP12.58□□□□□ -0.39
SMC4-202ENST00000357388 QRICH2Q9H0J4 1663 aa12.58□□□□□ -0.39
SMC4-202ENST00000357388 ARPC2O15144 300 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 IL3P08700 152 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 C7P10643 843 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 ALAS2P22557 587 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 AGTR1P30556 359 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 SLC10A7Q0GE19 358 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 SP140Q13342 867 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 MADCAM1Q13477 382 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 PUS10Q3MIT2 529 aaKnown RBP12.58□□□□□ -0.4
SMC4-202ENST00000357388 ANKDD1AQ495B1 522 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 DUS1LQ6P1R4 473 aaKnown RBP12.58□□□□□ -0.4
SMC4-202ENST00000357388 ERMP1Q7Z2K6 904 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 OR14C36Q8NHC7 312 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 HERVK_113Q902F9 699 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 GPR21Q99679 349 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 OR51V1Q9H2C8 321 aa12.58□□□□□ -0.4
SMC4-202ENST00000357388 TFB2MQ9H5Q4 396 aaKnown RBP12.58□□□□□ -0.4
SMC4-202ENST00000357388 AGO3Q9H9G7 860 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms