RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 COX18Q8N8Q8 333 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 OR52J3Q8NH60 311 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 ZUFSPQ96AP4 578 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 RGMAQ96B86 450 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 RNF31Q96EP0 1072 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 SCLYQ96I15 445 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 C1orf74Q96LT6 269 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 PSKH2Q96QS6 385 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 MYOCQ99972 504 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 SRMSQ9H3Y6 488 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 ABCB8Q9NUT2 735 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 P2RX2Q9UBL9 471 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 LTBP3Q9NS15 1303 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 IQCF5A8MTL0 148 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 RSL1D1O76021 490 aaKnown RBP11.49□□□□□ -0.57
COL9A1-202ENST00000357250 MATN4O95460 622 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 AHSGP02765 367 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 NOVP48745 357 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 EMX2Q04743 252 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 GPR17Q13304 367 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 TPRG1Q6ZUI0 275 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 DCAF4L2Q8NA75 395 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 FLCNQ8NFG4 579 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 GRPEL2Q8TAA5 225 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 DDX1Q92499 740 aaKnown RBP11.49□□□□□ -0.57
COL9A1-202ENST00000357250 SEC14L1Q92503 715 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 NUS1Q96E22 293 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 EBPLQ9BY08 206 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 MED28Q9H204 178 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 EXO5Q9H790 373 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 MRPS30Q9NP92 439 aaKnown RBP11.49□□□□□ -0.57
COL9A1-202ENST00000357250 SIRPGQ9P1W8 387 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 LAMB4A4D0S4 1761 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 KAT6AQ92794 2004 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 ANKRD66B4E2M5 251 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 TFECO14948 347 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 BCAS2O75934 225 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 F2P00734 622 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 AVPR1BP47901 424 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 TUBA1BP68363 451 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 OR2T5Q6IEZ7 315 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 TUBA1AQ71U36 451 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 GPALPP1Q8IXQ4 340 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 OR2T29Q8NH02 315 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 SMPDL3AQ92484 453 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 CCM2Q9BSQ5 444 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 NEUROD4Q9HD90 331 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 POLMQ9NP87 494 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 HS3ST4Q9Y661 456 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 CXorf49A8MYA2 514 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 NIPSNAP2O75323 286 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 SEMA3DO95025 777 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 SNAI1O95863 264 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 RLN1P04808 185 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 VIPR1P32241 457 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 RORCP51449 518 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 STC1P52823 247 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 RPS24P62847 133 aaKnown RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 HSF2Q03933 536 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 RAPSNQ13702 412 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 DUOXA1Q1HG43 343 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 TAF8Q7Z7C8 310 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 CADM2Q8N3J6 435 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 KCNJ9Q92806 393 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 CD84Q9UIB8 345 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 A0A0X1KG70 313 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 KDELR3O43731 214 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 EDIL3O43854 480 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 RASGRP1O95267 797 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 MT-ND1P03886 318 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 FPR1P21462 350 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 WNT7BP56706 349 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 DSTNP60981 165 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 ERMP1Q7Z2K6 904 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 FAM124AQ86V42 546 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 PIWIL1Q96J94 861 aaKnown RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 TRIB3Q96RU7 358 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 BCL2L14Q9BZR8 327 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 SP140LQ9H930 580 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 TRIM39Q9HCM9 518 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 MKKSQ9NPJ1 570 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 ZCCHC3Q9NUD5 404 aaKnown RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 COPS7AQ9UBW8 275 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 FBXW2Q9UKT8 454 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 LRRC42Q9Y546 428 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 PKD1L3Q7Z443 1732 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 ARVCFO00192 962 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 F7P08709 466 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 PEPDP12955 493 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 UGT1A3P35503 534 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 ACADVLP49748 655 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 ALDH3A2P51648 485 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 PPP3R1P63098 170 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 FAM189A2Q15884 450 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 ZNF630Q2M218 657 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 PRAMEF14Q5SWL7 426 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 PRAMEF13Q5VWM6 474 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 MBLAC2Q68D91 279 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 VITQ6UXI7 678 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 GLIS1Q8NBF1 620 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms