RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 LDLRAP1Q5SW96 308 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 PIP5KL1Q5T9C9 394 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 ZNF740Q8NDX6 193 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 CANT1Q8WVQ1 401 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 ZNF184Q99676 751 aaPredicted RBP17.12■□□□□ 0.33
NPAS3-202ENST00000356141 DNAJC11Q9NVH1 559 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 PCDHGB4Q9UN71 923 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 ASF1AQ9Y294 204 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 PCDHGB5Q9Y5G0 923 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 TSPAN11A1L157 253 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 RGS14O43566 566 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 NELFEP18615 380 aaKnown RBP17.12■□□□□ 0.33
NPAS3-202ENST00000356141 OXTRP30559 389 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 FCHO2Q0JRZ9 810 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 ITPRIPL2Q3MIP1 535 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 ZDHHC20Q5W0Z9 365 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 RD3Q7Z3Z2 195 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 PPP1R16AQ96I34 528 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 LRGUKQ96M69 825 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 CCL27Q9Y4X3 112 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 FADS3Q9Y5Q0 445 aa17.12■□□□□ 0.33
NPAS3-202ENST00000356141 TRBV23OR9-2A0A075B6M9 112 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 MYOCOSA0A1B0GUC4 107 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 A0A1W2PP18 115 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 GFYI3L273 518 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 AHCYL1O43865 530 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 ETHE1O95571 254 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 FESP07332 822 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 C8GP07360 202 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 IMPA1P29218 277 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 GNPDA1P46926 289 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 PRLHRP49683 370 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 DOC2AQ14183 400 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 RCAN2Q14206 197 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 WSCD2Q2TBF2 565 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 PLEKHS1Q5SXH7 462 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 SPATA19Q7Z5L4 167 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 PLPP6Q8IY26 295 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 DPY30Q9C005 99 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 SLC52A3Q9NQ40 469 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 TMEM181Q9P2C4 612 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 THAP10Q9P2Z0 257 aaPredicted RBP17.11■□□□□ 0.33
NPAS3-202ENST00000356141 KCNK6Q9Y257 313 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 ZNF106Q9H2Y7 1883 aaKnown RBP17.11■□□□□ 0.33
NPAS3-202ENST00000356141 C1QTNF3-AMACRE9PGA6 284 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 CBSLP0DN79 551 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 BCKDHAP12694 445 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 TCF3P15923 654 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 CBSP35520 551 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 ACADVLP49748 655 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 PTPN5P54829 565 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 GK3PQ14409 553 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 GSTA3Q16772 222 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 MTX3Q5HYI7 312 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 NANOGP8Q6NSW7 305 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 PQLC1Q8N2U9 271 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 FAM81AQ8TBF8 368 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 PNPT1Q8TCS8 783 aaKnown RBP17.11■□□□□ 0.33
NPAS3-202ENST00000356141 PPP2R3CQ969Q6 453 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 NEIL2Q969S2 332 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 ECSITQ9BQ95 431 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 IKZF5Q9H5V7 419 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 NANOGQ9H9S0 305 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 FBXL12Q9NXK8 326 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 SH3BP5O60239 455 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 BCAS2O75934 225 aaPredicted RBP17.11■□□□□ 0.33
NPAS3-202ENST00000356141 SLCO2B1O94956 709 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 EGFP01133 1207 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 EBLN1P0CF75 366 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 ACP5P13686 325 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 NFKBIAP25963 317 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 PSMB5P28074 263 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 DCDC1P59894 354 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 LIPEQ05469 1076 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 ELP6Q0PNE2 266 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 FGL2Q14314 439 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 ARHGAP22Q7Z5H3 698 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 DHFR2Q86XF0 187 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 SPNS1Q9H2V7 528 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 SMOXQ9NWM0 555 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.11■□□□□ 0.33
NPAS3-202ENST00000356141 LRRC42Q9Y546 428 aa17.11■□□□□ 0.33
NPAS3-202ENST00000356141 K7EQS6 105 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 CLDN2P57739 230 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 OR4D2P58180 307 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 CYP4F2P78329 520 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 ANO7Q6IWH7 933 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TMIEQ8NEW7 156 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 ZNF480Q8WV37 535 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 ASB9Q96DX5 294 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 LRIG1Q96JA1 1093 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 THUMPD3Q9BV44 507 aaKnown RBP17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TRIM4Q9C037 500 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 RDH14Q9HBH5 336 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 VAPAQ9P0L0 249 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 ST14Q9Y5Y6 855 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TBC1D3DA0A087WVF3 549 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TBC1D3IA0A087WXS9 549 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TBC1D3EA0A087X179 549 aa17.1■□□□□ 0.33
NPAS3-202ENST00000356141 TBC1D3KA0A087X1G2 549 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms