RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ZNF432O94892 652 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 ALDH3A2P51648 485 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 TEAD2Q15562 447 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 TMEM198Q66K66 360 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 ULK3Q6PHR2 472 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 CTU1Q7Z7A3 348 aaKnown RBP12.93□□□□□ -0.34
SCN8A-202ENST00000355133 LRRTM4Q86VH4 590 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 ZNF280BQ86YH2 543 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 HCAR2Q8TDS4 363 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 TOP1MTQ969P6 601 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 DGAT2Q96PD7 388 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 SLC35A5Q9BS91 424 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 TMEM175Q9BSA9 504 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 VPS29Q9UBQ0 182 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 PDE10AQ9Y233 779 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 A0A0U1RQF3 1178 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 CDC7O00311 574 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 TRMUO75648 421 aaKnown RBP12.93□□□□□ -0.34
SCN8A-202ENST00000355133 PRAMEF12O95522 483 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 CYB5AP00167 134 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 RENP00797 406 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 ATP1B2P14415 290 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-202ENST00000355133 VIPR1P32241 457 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 ERVK-8P63133 956 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 SWI5Q1ZZU3 235 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 CRTC2Q53ET0 693 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-202ENST00000355133 CLEC12AQ5QGZ9 265 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 PIM3Q86V86 326 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 UBE2J2Q8N2K1 259 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 TTLQ8NG68 377 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 RGMAQ96B86 450 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 ZSCAN5AQ9BUG6 496 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 FBXL12Q9NXK8 326 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 SRRDQ9UH36 339 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 GRIP1Q9Y3R0 1128 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 NFKBIEO00221 500 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 PLGP00747 810 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-202ENST00000355133 SLC7A1P30825 629 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 TSPAN5P62079 268 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 MYLK3Q32MK0 819 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 LRP10Q7Z4F1 713 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 GRASPQ7Z6J2 395 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-202ENST00000355133 OR2AP1Q8NGE2 309 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 TLCD1Q96CP7 247 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 COPS4Q9BT78 406 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 ELAC1Q9H777 363 aaKnown RBP12.93□□□□□ -0.34
SCN8A-202ENST00000355133 COQ10BQ9H8M1 238 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 SLC22A14Q9Y267 594 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 CSNK2A2P19784 350 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-202ENST00000355133 ATP5A1P25705 553 aaKnown RBP12.93□□□□□ -0.34
SCN8A-202ENST00000355133 NRIP1P48552 1158 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 GALK1P51570 392 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 RAB2AP61019 212 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 RPP38P78345 283 aaKnown RBP12.93□□□□□ -0.34
SCN8A-202ENST00000355133 CREB5Q02930 508 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 PCDHAC1Q9H158 963 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 ATXN10Q9UBB4 475 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 PCDHGA3Q9Y5H0 932 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 DAPL1A0PJW8 107 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 SNX4O95219 450 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 DLG1Q12959 904 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 KHDC1Q4VXA5 237 aaKnown RBP12.92□□□□□ -0.34
SCN8A-202ENST00000355133 NXPE1Q8N323 547 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 ZNF347Q96SE7 839 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 MARK1Q9P0L2 795 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 STOML2Q9UJZ1 356 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 TMEM98Q9Y2Y6 226 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 TPD52L2O43399 206 aaKnown RBP12.92□□□□□ -0.34
SCN8A-202ENST00000355133 ITM2AO43736 263 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 RAP2AP10114 183 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 VBP1P61758 197 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 E2F2Q14209 437 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 LACTB2Q53H82 288 aaPredicted RBP12.92□□□□□ -0.34
SCN8A-202ENST00000355133 IDNKQ5T6J7 187 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 OGFOD2Q6N063 350 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 NAT8LQ8N9F0 302 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 COL21A1Q96P44 957 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 TCF7L1Q9HCS4 588 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 MALT1Q9UDY8 824 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 FZD4Q9ULV1 537 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 EDDM13A0A1B0GTR0 161 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 INPPL1O15357 1258 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 FMO3P31513 532 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 SLC11A1P49279 550 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 KIAA1161Q6NSJ0 714 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 KCTD8Q6ZWB6 473 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 OSTM1Q86WC4 334 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 OR2L3Q8NG85 312 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 UFD1Q92890 307 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 ZSWIM3Q96MP5 696 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 POLR2J3Q9H1A7 115 aaKnown RBP12.92□□□□□ -0.34
SCN8A-202ENST00000355133 TXNRD2Q9NNW7 524 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 CXorf49A8MYA2 514 aaPredicted RBP12.92□□□□□ -0.34
SCN8A-202ENST00000355133 CPNE3O75131 537 aaKnown RBP12.92□□□□□ -0.34
SCN8A-202ENST00000355133 CXCR1P25024 350 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 ARCN1P48444 511 aaKnown RBP12.92□□□□□ -0.34
SCN8A-202ENST00000355133 AQP4P55087 323 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 GHRHRQ02643 423 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 GRM2Q14416 872 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms