RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 SEMA6BQ9H3T3 888 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 TMEM39AQ9NV64 488 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 SDK1Q7Z5N4 2213 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 OIP5O43482 229 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 FGL2Q14314 439 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 LRRC55Q6ZSA7 311 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 MON1BQ7L1V2 547 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 ZNF641Q96N77 438 aaPredicted RBP7.87□□□□□ -1.15
HTT-201ENST00000355072 CABIN1Q9Y6J0 2220 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 GPR75-ASB3A0A0A6YYF3 556 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 PEX11AO75192 247 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 SGPL1O95470 568 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 CYP3A5P20815 502 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 MAP2K4P45985 399 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 IRF4Q15306 451 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 AKR1C8PQ5T2L2 129 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 DNAJC22Q8N4W6 341 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 OR2L3Q8NG85 312 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 RADILQ96JH8 1075 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 CADM1Q9BY67 442 aaKnown RBP7.87□□□□□ -1.15
HTT-201ENST00000355072 SEMA4CQ9C0C4 833 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 BRD7Q9NPI1 651 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 GABRDO14764 452 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 RFPL2O75678 378 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 CETPP11597 493 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 MYF6P23409 242 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 JAM2P57087 298 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 FSTL4Q6MZW2 842 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 TNS4Q8IZW8 715 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 TSEN2Q8NCE0 465 aaKnown RBP7.87□□□□□ -1.15
HTT-201ENST00000355072 RNF128Q8TEB7 428 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 CNTN3Q9P232 1028 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 SEC14L2O76054 403 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 ETS2P15036 469 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 EPHB3P54753 998 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 TCEAL1Q15170 157 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 SLC36A4Q6YBV0 504 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 LRRC70Q7Z2Q7 622 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 LPIN3Q9BQK8 851 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 NOBOXO60393 691 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 CRYZQ08257 329 aaKnown RBP7.87□□□□□ -1.15
HTT-201ENST00000355072 KHDC1Q4VXA5 237 aaKnown RBP7.87□□□□□ -1.15
HTT-201ENST00000355072 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.87□□□□□ -1.15
HTT-201ENST00000355072 ZNF781Q8N8C0 355 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 MCMBPQ9BTE3 642 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 NAALAD2Q9Y3Q0 740 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 NRCAMQ92823 1304 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 ACADMP11310 421 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 CLVS2Q5SYC1 327 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 REP15Q6BDI9 236 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 UNC5AQ6ZN44 842 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 ALYREFQ86V81 257 aaKnown RBP7.87□□□□□ -1.15
HTT-201ENST00000355072 TWIST2Q8WVJ9 160 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 CNTNAP2Q9UHC6 1331 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 MOSPD1Q9UJG1 213 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 NR2E3Q9Y5X4 410 aa7.87□□□□□ -1.15
HTT-201ENST00000355072 TNFRSF10BO14763 440 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 HSD3B1P14060 373 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 HSD3B2P26439 372 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 VAMP2P63027 116 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 FOXO4P98177 505 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 DNAJC1Q96KC8 554 aaKnown RBP7.86□□□□□ -1.15
HTT-201ENST00000355072 GAL3ST1Q99999 423 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 OAZ3Q9UMX2 235 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 RNF6Q9Y252 685 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 C5P01031 1676 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 TBX10O75333 385 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 UBBP0CG47 229 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 UBCP0CG48 685 aaKnown RBP7.86□□□□□ -1.15
HTT-201ENST00000355072 BMP1P13497 986 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 HOXB9P17482 250 aaPredicted RBP7.86□□□□□ -1.15
HTT-201ENST00000355072 EPORP19235 508 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 MGAT1P26572 445 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 BMP8BP34820 402 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 YBEYP58557 167 aaPredicted RBP7.86□□□□□ -1.15
HTT-201ENST00000355072 RPS27AP62979 156 aaKnown RBP7.86□□□□□ -1.15
HTT-201ENST00000355072 UBA52P62987 128 aaKnown RBP7.86□□□□□ -1.15
HTT-201ENST00000355072 C3orf67Q6ZVT6 689 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 BMP8AQ7Z5Y6 402 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 ZDHHC21Q8IVQ6 265 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 MKRN2Q9H000 416 aaKnown RBP7.86□□□□□ -1.15
HTT-201ENST00000355072 SNTG2Q9NY99 539 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 TMEM59LQ9UK28 342 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 FAM186AA6NE01 2351 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 LRP5LA4QPB2 252 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 TRAPPC2P0DI81 140 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 TRAPPC2BP0DI82 140 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 NDUFS1P28331 727 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 GPX6P59796 221 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 HJURPQ8NCD3 748 aaPredicted RBP7.86□□□□□ -1.15
HTT-201ENST00000355072 SIPA1Q96FS4 1042 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 PMF1-BGLAPU3KQ54 211 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 ROBO2Q9HCK4 1378 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 B4GALT4O60513 344 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 RENP00797 406 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 CSF1RP07333 972 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 RAB3AP20336 220 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 OGDHQ02218 1023 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 SSX2Q16385 188 aa7.86□□□□□ -1.15
HTT-201ENST00000355072 C15orf52Q6ZUT6 534 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms