RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 B3GALT4O96024 378 aa23.91■■□□□ 1.42
CPNE1-202ENST00000352393 PDYNP01213 254 aa23.91■■□□□ 1.42
CPNE1-202ENST00000352393 ALDH2P05091 517 aa23.91■■□□□ 1.42
CPNE1-202ENST00000352393 HPCAL1P37235 193 aa23.91■■□□□ 1.42
CPNE1-202ENST00000352393 LAIR1Q6GTX8 287 aa23.91■■□□□ 1.42
CPNE1-202ENST00000352393 ANKRD46Q86W74 232 aa23.91■■□□□ 1.42
CPNE1-202ENST00000352393 RRAGCQ9HB90 399 aa23.91■■□□□ 1.42
CPNE1-202ENST00000352393 NECTIN3Q9NQS3 549 aa23.91■■□□□ 1.42
CPNE1-202ENST00000352393 VPS51Q9UID3 782 aa23.91■■□□□ 1.42
CPNE1-202ENST00000352393 DAPK2Q9UIK4 370 aa23.91■■□□□ 1.42
CPNE1-202ENST00000352393 SAMD4AQ9UPU9 718 aaKnown RBP23.91■■□□□ 1.42
CPNE1-202ENST00000352393 OR51B4Q9Y5P0 310 aa23.91■■□□□ 1.42
CPNE1-202ENST00000352393 PRPS2P11908 318 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 FMO3P31513 532 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 CLK3P49761 638 aaKnown RBP23.9■■□□□ 1.42
CPNE1-202ENST00000352393 FLT3LGP49771 235 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 SLC14A1Q13336 389 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 ADPRMQ3LIE5 342 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 LYPLAL1Q5VWZ2 237 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 CEP68Q76N32 757 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 TMEM173Q86WV6 379 aaPredicted RBP23.9■■□□□ 1.42
CPNE1-202ENST00000352393 NDNFQ8TB73 568 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 S100ZQ8WXG8 99 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 TESCQ96BS2 214 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 TAMM41Q96BW9 452 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 MTFMTQ96DP5 389 aaKnown RBP23.9■■□□□ 1.42
CPNE1-202ENST00000352393 HHIPQ96QV1 700 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 ABCG2Q9UNQ0 655 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 MAN1A2O60476 641 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 CCNDBP1O95273 360 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 FSHRP23945 695 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 HNRNPFP52597 415 aaKnown RBP23.9■■□□□ 1.42
CPNE1-202ENST00000352393 CXCR4P61073 352 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 ELAVL2Q12926 359 aaKnown RBP23.9■■□□□ 1.42
CPNE1-202ENST00000352393 CDKN3Q16667 212 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 TTLL9Q3SXZ7 439 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 MFSD4AQ8N468 514 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 TTPALQ9BTX7 342 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 HTATIP2Q9BUP3 242 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 KLF16Q9BXK1 252 aaPredicted RBP23.9■■□□□ 1.42
CPNE1-202ENST00000352393 RIBC2Q9H4K1 309 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 LATS2Q9NRM7 1088 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 DNMT3BQ9UBC3 853 aaKnown RBP23.9■■□□□ 1.42
CPNE1-202ENST00000352393 TPRKBQ9Y3C4 175 aa23.9■■□□□ 1.42
CPNE1-202ENST00000352393 NT5C1B-RDH14C9J2C7 533 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 TRBC1P01850 177 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 HMGA1P17096 107 aaKnown RBP23.89■■□□□ 1.42
CPNE1-202ENST00000352393 MAP2K4P45985 399 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 MASP1P48740 699 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 DAPP51397 102 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 RPS3AP61247 264 aaKnown RBP23.89■■□□□ 1.42
CPNE1-202ENST00000352393 ARHGEF7Q14155 803 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 CPSF6Q16630 551 aaKnown RBP eCLIP23.89■■□□□ 1.42
CPNE1-202ENST00000352393 KDM4DQ6B0I6 523 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 OR2T5Q6IEZ7 315 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 BEND7Q8N7W2 519 aaPredicted RBP23.89■■□□□ 1.42
CPNE1-202ENST00000352393 OR2T29Q8NH02 315 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 ZFP90Q8TF47 636 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 ZNF641Q96N77 438 aaPredicted RBP23.89■■□□□ 1.42
CPNE1-202ENST00000352393 RNF38Q9H0F5 515 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 TM9SF3Q9HD45 589 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 GPRC5BQ9NZH0 403 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 CRLS1Q9UJA2 301 aa23.89■■□□□ 1.42
CPNE1-202ENST00000352393 ANAPC1Q9H1A4 1944 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 KCNE1BA0A087WTH5 132 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 GLYATL1P3A0A0U1RQE8 302 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 KRBA1A5PL33 1030 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 TBL1XO60907 577 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 JRKO75564 520 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 BPIP17213 487 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 SDC1P18827 310 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 PRPH2P23942 346 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 TACR1P25103 407 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 GBX1Q14549 363 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 NPTX1Q15818 432 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 SYT6Q5T7P8 510 aaPredicted RBP23.89■■□□□ 1.41
CPNE1-202ENST00000352393 FAM9CQ8IZT9 166 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 FBXO22Q8NEZ5 403 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 OR6K2Q8NGY2 324 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 TSSK3Q96PN8 268 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 ZNF300Q96RE9 604 aaPredicted RBP23.89■■□□□ 1.41
CPNE1-202ENST00000352393 TM6SF2Q9BZW4 377 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 FBXO8Q9NRD0 319 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 STOML2Q9UJZ1 356 aa23.89■■□□□ 1.41
CPNE1-202ENST00000352393 TOR1BO14657 336 aa23.88■■□□□ 1.41
CPNE1-202ENST00000352393 SEMG1P04279 462 aa23.88■■□□□ 1.41
CPNE1-202ENST00000352393 CYP4B1P13584 511 aa23.88■■□□□ 1.41
CPNE1-202ENST00000352393 SIM2Q14190 667 aaPredicted RBP23.88■■□□□ 1.41
CPNE1-202ENST00000352393 LAPTM4AQ15012 233 aa23.88■■□□□ 1.41
CPNE1-202ENST00000352393 CHRNA6Q15825 494 aa23.88■■□□□ 1.41
CPNE1-202ENST00000352393 GGTA1PQ4G0N0 100 aa23.88■■□□□ 1.41
CPNE1-202ENST00000352393 ADGRG2Q8IZP9 1017 aa23.88■■□□□ 1.41
CPNE1-202ENST00000352393 BCL7CQ8WUZ0 217 aaPredicted RBP23.88■■□□□ 1.41
CPNE1-202ENST00000352393 SLC32A1Q9H598 525 aa23.88■■□□□ 1.41
CPNE1-202ENST00000352393 ELAC1Q9H777 363 aaKnown RBP23.88■■□□□ 1.41
CPNE1-202ENST00000352393 IL1RAPQ9NPH3 570 aa23.88■■□□□ 1.41
CPNE1-202ENST00000352393 PLXNB3Q9ULL4 1909 aa23.88■■□□□ 1.41
CPNE1-202ENST00000352393 K7ERQ8 282 aa23.87■■□□□ 1.41
CPNE1-202ENST00000352393 CLDN7O95471 211 aa23.87■■□□□ 1.41
CPNE1-202ENST00000352393 ZNF682O95780 498 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms