RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 KYQ8NBH2 561 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 OR2L8Q8NGY9 312 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 SORT1Q99523 831 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 KCNH6Q9H252 994 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 SLCO1B3Q9NPD5 702 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 SLC22A14Q9Y267 594 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 LNP1A1A4G5 178 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 ZNF839A8K0R7 811 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 LYPLA1O75608 230 aaPredicted RBP26.21■■□□□ 1.79
SSBP4-202ENST00000348495 WDR47O94967 919 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 CHRNGP07510 517 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 EPORP19235 508 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 SHMT2P34897 504 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 GTF2H2Q13888 395 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 GTF2H2CQ6P1K8 395 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 TMEM26Q6ZUK4 368 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 ARL10Q8N8L6 244 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 OR4C6Q8NH72 309 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 PPP4R1Q8TF05 950 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 LCN9Q8WX39 176 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 MED8Q96G25 268 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 OR4K3Q96R72 315 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 DUSP23Q9BVJ7 150 aa26.21■■□□□ 1.79
SSBP4-202ENST00000348495 PPP6CO00743 305 aa26.2■■□□□ 1.79
SSBP4-202ENST00000348495 UBFD1O14562 309 aaKnown RBP26.2■■□□□ 1.79
SSBP4-202ENST00000348495 PPM1DO15297 605 aa26.2■■□□□ 1.79
SSBP4-202ENST00000348495 LCP2Q13094 533 aa26.2■■□□□ 1.79
SSBP4-202ENST00000348495 CAPN13Q6MZZ7 669 aaPredicted RBP26.2■■□□□ 1.79
SSBP4-202ENST00000348495 THOC6Q86W42 341 aaKnown RBP26.2■■□□□ 1.79
SSBP4-202ENST00000348495 AMIGO1Q86WK6 493 aa26.2■■□□□ 1.79
SSBP4-202ENST00000348495 TEX9Q8N6V9 391 aa26.2■■□□□ 1.79
SSBP4-202ENST00000348495 JPH3Q8WXH2 748 aaPredicted RBP26.2■■□□□ 1.79
SSBP4-202ENST00000348495 C7orf26Q96N11 449 aa26.2■■□□□ 1.79
SSBP4-202ENST00000348495 UCK1Q9HA47 277 aa26.2■■□□□ 1.79
SSBP4-202ENST00000348495 DNAJC11Q9NVH1 559 aa26.2■■□□□ 1.79
SSBP4-202ENST00000348495 OR6C2Q9NZP2 312 aa26.2■■□□□ 1.79
SSBP4-202ENST00000348495 A0A1W2PPV9 198 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 TRIM38O00635 465 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 ZNF883P0CG24 379 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 PIK3CGP48736 1102 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 SLC35F3Q8IY50 421 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 TRPC4APQ8TEL6 797 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 SMPDL3AQ92484 453 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 SEMA4BQ9NPR2 832 aaPredicted RBP26.19■■□□□ 1.78
SSBP4-202ENST00000348495 CCDC177Q9NQR7 707 aaPredicted RBP26.19■■□□□ 1.78
SSBP4-202ENST00000348495 MUC6Q6W4X9 2439 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 EPB42P16452 691 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 TSPAN8P19075 237 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 CCND1P24385 295 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 ZCCHC8Q6NZY4 707 aaKnown RBP26.19■■□□□ 1.78
SSBP4-202ENST00000348495 SUSD1Q6UWL2 747 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 OR4E2Q8NGC2 313 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 STN1Q9H668 368 aaKnown RBP26.19■■□□□ 1.78
SSBP4-202ENST00000348495 FAM86C1Q9NVL1 165 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 HAO1Q9UJM8 370 aa26.19■■□□□ 1.78
SSBP4-202ENST00000348495 FRYLO94915 3013 aa26.18■■□□□ 1.78
SSBP4-202ENST00000348495 OR7A17O14581 309 aa26.18■■□□□ 1.78
SSBP4-202ENST00000348495 SNUPNO95149 360 aaKnown RBP26.18■■□□□ 1.78
SSBP4-202ENST00000348495 HSPA4LO95757 839 aa26.18■■□□□ 1.78
SSBP4-202ENST00000348495 MLYCDO95822 493 aa26.18■■□□□ 1.78
SSBP4-202ENST00000348495 C2orf73Q8N5S3 287 aaPredicted RBP26.18■■□□□ 1.78
SSBP4-202ENST00000348495 SRMSQ9H3Y6 488 aa26.18■■□□□ 1.78
SSBP4-202ENST00000348495 NOL11Q9H8H0 719 aaKnown RBP26.18■■□□□ 1.78
SSBP4-202ENST00000348495 IPPKQ9H8X2 491 aa26.18■■□□□ 1.78
SSBP4-202ENST00000348495 DNAAF2Q9NVR5 837 aaKnown RBP26.18■■□□□ 1.78
SSBP4-202ENST00000348495 RALGAPA1Q6GYQ0 2036 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 A0A1B0GTL3 188 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 FAM221BA6H8Z2 402 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 PRICKLE3O43900 615 aaPredicted RBP26.17■■□□□ 1.78
SSBP4-202ENST00000348495 EDF1O60869 148 aaKnown RBP26.17■■□□□ 1.78
SSBP4-202ENST00000348495 ALPPL2P10696 532 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 NPPBP16860 134 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 PLCL1Q15111 1095 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 FAM47EQ6ZV65 393 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 ADGRF3Q8IZF5 1079 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 OR52B6Q8NGF0 335 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 CHMP6Q96FZ7 201 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 ZNF382Q96SR6 550 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 ANGPTL3Q9Y5C1 460 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 SRRM3A6NNA2 597 aaPredicted RBP26.17■■□□□ 1.78
SSBP4-202ENST00000348495 SEC24CP53992 1094 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 ATXN3P54252 364 aaPredicted RBP26.17■■□□□ 1.78
SSBP4-202ENST00000348495 SH3BP2P78314 561 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 PCDH1Q08174 1060 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 CDC16Q13042 620 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 SF3A2Q15428 464 aaKnown RBP26.17■■□□□ 1.78
SSBP4-202ENST00000348495 ZNF761Q86XN6 746 aaPredicted RBP26.17■■□□□ 1.78
SSBP4-202ENST00000348495 LRRC34Q8IZ02 419 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 FAM181AQ8N9Y4 354 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 SETD7Q8WTS6 366 aaKnown RBP26.17■■□□□ 1.78
SSBP4-202ENST00000348495 SH3KBP1Q96B97 665 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 MIPEPQ99797 713 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 EML4Q9HC35 981 aaKnown RBP26.17■■□□□ 1.78
SSBP4-202ENST00000348495 ZNF225Q9UK10 706 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 PCDHGB2Q9Y5G2 931 aa26.17■■□□□ 1.78
SSBP4-202ENST00000348495 LILRA5A6NI73 299 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 BTN3A3O00478 584 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 KATNA1O75449 491 aa26.16■■□□□ 1.78
SSBP4-202ENST00000348495 VIMP08670 466 aaKnown RBP26.16■■□□□ 1.78
SSBP4-202ENST00000348495 PEBP1P30086 187 aaKnown RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms