RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 RETREG1Q9H6L5 497 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 RC3H2Q9HBD1 1191 aaKnown RBP5.88□□□□□ -1.47
CLCN3-201ENST00000347613 GPATCH2Q9NW75 528 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 WWOXQ9NZC7 414 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 BACE2Q9Y5Z0 518 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 PMF1-BGLAPU3KQ54 211 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 WDFY4Q6ZS81 3184 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 OR2AG2A6NM03 316 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 G3V2T6 193 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 K7EPI3 171 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 LILRB3O75022 631 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 VPS4BO75351 444 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 ULK1O75385 1050 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 CREG1O75629 220 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 SOD2P04179 222 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 RAP2AP10114 183 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 PDHA2P29803 388 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 ALDH4A1P30038 563 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 HMOX2P30519 316 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 BMXP51813 675 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 RAE1P78406 368 aaKnown RBP5.88□□□□□ -1.47
CLCN3-201ENST00000347613 VLDLRP98155 873 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 IFITM3Q01628 133 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 BCL2L1Q07817 233 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 UGT8Q16880 541 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 PLEKHG6Q3KR16 790 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 KIAA1841Q6NSI8 718 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 SPESP1Q6UW49 350 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 ABRAXAS1Q6UWZ7 409 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 MACC1Q6ZN28 852 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 PTOV1Q86YD1 416 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 GABPB2Q8TAK5 448 aaPredicted RBP5.88□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF689Q96CS4 500 aaPredicted RBP5.88□□□□□ -1.47
CLCN3-201ENST00000347613 ZSWIM3Q96MP5 696 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 DEFB118Q96PH6 123 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 MTERF1Q99551 399 aaKnown RBP5.88□□□□□ -1.47
CLCN3-201ENST00000347613 TMEM175Q9BSA9 504 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 NTMT1Q9BV86 223 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 BTBD2Q9BX70 525 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 ARMC7Q9H6L4 198 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 GORASP2Q9H8Y8 452 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 LRTM1Q9HBL6 345 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 ZDHHC4Q9NPG8 344 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 DCAF13Q9NV06 445 aaKnown RBP5.88□□□□□ -1.47
CLCN3-201ENST00000347613 OPTCQ9UBM4 332 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 ITM2BQ9Y287 266 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF451Q9Y4E5 1061 aa5.88□□□□□ -1.47
CLCN3-201ENST00000347613 FREM2Q5SZK8 3169 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 PLXNA2O75051 1894 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 PTGES3LE9PB15 166 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 hCG_2039718K7EN88 272 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 PLK4O00444 970 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 TOR1BO14657 336 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 PRRG1O14668 218 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 PER2O15055 1255 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 CPNE6O95741 557 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 OTCP00480 354 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 UGT2B4P06133 528 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 HOXB8P17481 243 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-201ENST00000347613 RPS3P23396 243 aaKnown RBP eCLIP5.87□□□□□ -1.47
CLCN3-201ENST00000347613 ETV3P41162 512 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 PREPP48147 710 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 HLCSP50747 726 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 CTSCP53634 463 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 CRISP3P54108 245 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 PGS1Q32NB8 556 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 DOK6Q6PKX4 331 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 SLC39A11Q8N1S5 342 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 BBS5Q8N3I7 341 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 SLC15A4Q8N697 577 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 DCAF4L2Q8NA75 395 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 FAM81AQ8TBF8 368 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 CYB5D2Q8WUJ1 264 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 SDCCAG3Q96C92 435 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 ECHDC3Q96DC8 303 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 SLC47A1Q96FL8 570 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 TRMT2BQ96GJ1 504 aaKnown RBP5.87□□□□□ -1.47
CLCN3-201ENST00000347613 APOLD1Q96LR9 279 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 FAM126AQ9BYI3 521 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-201ENST00000347613 HIPK3Q9H422 1215 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 ACTR8Q9H981 624 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 HMX1Q9NP08 348 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-201ENST00000347613 PCDH12Q9NPG4 1184 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-201ENST00000347613 KIAA1549LQ6ZVL6 1849 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 A0A087WXM4 84 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 E7EQ34 232 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 BOLA2-SMG1P6H3BVE0 249 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 RAD51BO15315 384 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 MOSPD3O75425 235 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 RFPL2O75678 378 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 SEC14L2O76054 403 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 CHEK2O96017 543 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 CXCL10P02778 98 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 RPLP2P05387 115 aaKnown RBP5.87□□□□□ -1.47
CLCN3-201ENST00000347613 ACRP10323 421 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 THRBP10828 461 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 COL6A1P12109 1028 aa5.87□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF7P17097 686 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-201ENST00000347613 FMO3P31513 532 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms